HHsearch alignment for GI: 254780670 and conserved domain: pfam07476
>pfam07476 MAAL_C Methylaspartate ammonia-lyase C-terminus. Methylaspartate ammonia-lyase EC:4.3.1.2 catalyses the second step of fermentation of glutamate. It is a homodimer. This family represents the C-terminal region of Methylaspartate ammonia-lyase and contains a TIM barrel fold similar to the pfam01188. This family represents the catalytic domain and contains a metal binding site.
Probab=97.97 E-value=0.00013 Score=54.52 Aligned_cols=147 Identities=21% Similarity=0.301 Sum_probs=116.1
Q ss_pred CCHHHHHHHHHHHHHH-CC-EEEEECCCCCCC----HHHHHHHHHHC---CCCEEEECCCEEECCHHHHHHHHHCCCCCE
Q ss_conf 6878999999987654-48-699776763104----23799886423---883685043000021488852100386522
Q gi|254780670|r 261 LQPNEMASYLANLVDQ-YP-IYSIEDGMSEDD----WHGWKILTNKI---GSNCQLVGDDLFVTNPERLHKGINEEVANA 331 (424)
Q Consensus 261 ~t~~elid~y~~l~~~-yP-I~sIEDP~~e~D----~~gw~~l~~~~---g~~~~IvGDDL~vTn~~rl~~gi~~~~~Na 331 (424)
T Consensus 87 ~d~~~~adYl~~Le~aaap~~L~iEgPmd~g~r~~Qie~l~~Lr~~L~~~G~~v~iVADEW-CNT~eDI~~F~da~A~~m 165 (249)
T pfam07476 87 NDLDRMADYLATLEEAAAPFPLRIEGPMDAGSKEAQIERLAALREKLDRRGIGVEIVADEW-CNTLEDIREFVDAGAADM 165 (249)
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHH-CCCHHHHHHHHHCCCCCE
T ss_conf 9789999999999985689724530775667759999999999999996489847984021-089899999996688667
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH--HHHHHHHHHCCCHHEECCCCHH--H-HHHHHHHHHHHH
Q ss_conf 3425453003899999999999879869995078887235--8998999819980100756114--4-899999999999
Q gi|254780670|r 332 ILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDH--TIADLAVATNCGQIKTGSLARS--D-RIAKYNQLIRIE 406 (424)
Q Consensus 332 iliK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~--~iaDLAVg~~a~~iK~G~~~R~--E-R~aKyNrLlrIe 406 (424)
T Consensus 166 VQIKtPDLGgi~n~ieAvlyC~~~g~gaYlGGtCNETd~SAr~~~hvalAt~~~q~LaK-PGmG~DEG~mIv~NEM~R~l 244 (249)
T pfam07476 166 VQIKTPDLGGINNTIEAVLYCKEKGVGAYLGGTCNETDRSARVSVHVALATRPDQMLAK-PGMGVDEGLMIVTNEMNRTL 244 (249)
T ss_pred EEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHCC-CCCCCCCHHHHHHHHHHHHH
T ss_conf 88648975554669999998621694165056555430257776567752188888169-98876525899998999999
Q ss_pred HHH
Q ss_conf 983
Q gi|254780670|r 407 ESL 409 (424)
Q Consensus 407 e~L 409 (424)
T Consensus 245 al~ 247 (249)
T pfam07476 245 ALL 247 (249)
T ss_pred HHH
T ss_conf 984