HHsearch results for GI: 254780670 and protein with PDBid: 2nql_A
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, PSI, nysgxrc; 1.80A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=8.8e-14 Score=120.79 Aligned_cols=300 Identities=14% Similarity=0.163 Sum_probs=194.5
Q ss_pred CEEEEEEEEEEEECCCCC-------------------------------EEEEEEEECCCCEEEEECCCCCCCCCCEEEE
Q ss_conf 910589986886079784-------------------------------2999999848976766344786647754676
Q gi|254780670|r 1 MFINDIIAREVIDSRGSP-------------------------------TIEVDVCLEDGSTGRAMVPSGASTGIHEAFE 49 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~P-------------------------------TvEvev~~~~g~~gra~~PSGaStG~~Ea~e 49 (424)
++|++|..+.+---.-.| +|=|+|+|++|.+|.+-+.+..++
T Consensus 3 ~~I~~ve~~~~~~Pl~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlV~i~td~G~~G~GE~~~~~~~------- 75 (388)
T 2nql_A 3 SPIATVEVFTLTQPRKVPYLGALREGEVVNPNGYIVRKGNRTVYPTFDRSVLVRMTTEAGTVGWGETYGIVAP------- 75 (388)
T ss_dssp CCEEEEEEEEEEECCCSCCGGGCCSCCCCBGGGEEECTTTCCEEESSEEEEEEEEEETTCCEEEEEEECSSCH-------
T ss_pred CEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCH-------
T ss_conf 8224699999736767763255564333443210002467544465676299999978999899742688884-------
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCCH
Q ss_conf 268986516804899999998756789759885578988864653036643-2212322220244899875266349848
Q gi|254780670|r 50 LRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPN-KSRLGANAILGVSLAVSKAAAQTSNLPL 128 (424)
Q Consensus 50 lrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~n-ks~lGaNailAvSlA~akA~A~~~~~pL 128 (424)
......+++.++|.|+|+++.+...+-+.|...--... ...+...++-|+.+|++-+.++..++||
T Consensus 76 -------------~~~~~~i~~~l~p~liG~d~~~~~~i~~~l~~~~~~~~~~~g~~~~A~said~AlwDl~gK~~g~Pl 142 (388)
T 2nql_A 76 -------------GAVAALINDLLAGFVIGRDASDPSAVYDDLYDMMRVRGYTGGFYVDALAALDIALWDIAGQEAGKSI 142 (388)
T ss_dssp -------------HHHHHHHHHTHHHHHTTCCSSSHHHHHHHHHHHHGGGTCSSHHHHHHHHHHHHHHHHHHHHHHTSBH
T ss_pred -------------HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf -------------9999999999999967999668999999999988750666524789999999999999975526870
Q ss_pred HHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCC
Q ss_conf 882253245647543000003664556776610256514887748999899999999999875200001---36765576
Q gi|254780670|r 129 YKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGG 205 (424)
Q Consensus 129 y~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGG 205 (424)
|+.|++... .+|+... .+ +..+..+..+.. +...++|+. ..+|..
T Consensus 143 ~~LLGg~~~-~~~~~~s-~~--------------------~~~~~~~~~~~~--------~~~~~~Gf~~~Kik~~~~-- 190 (388)
T 2nql_A 143 RDLLGGGVD-SFPAYVS-GL--------------------PERTLKARGELA--------KYWQDRGFNAFKFATPVA-- 190 (388)
T ss_dssp HHHTTCCCS-EEEEEEE-CC--------------------CCSSHHHHHHHH--------HHHHHTTCCEEEEEGGGC--
T ss_pred CCCCCCCCC-CCCCCCC-CC--------------------CCCCHHHHHHHH--------HHHHHCCCCCCCCCCCCC--
T ss_conf 001688543-1001113-46--------------------778577799999--------999974987334565566--
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECC
Q ss_conf 44886846899999999997538531110234311046532027851111468656878999999987654486997767
Q gi|254780670|r 206 FSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDG 285 (424)
Q Consensus 206 fap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP 285 (424)
.....+-+..+.++ .|.++.|.+|+. ...+.++-+++...| ++|.+.++|+|
T Consensus 191 ----~~~d~~~v~~ir~~-------~g~~~~l~vDaN----------------~~~~~~~A~~~~~~l-~~~~~~~~EeP 242 (388)
T 2nql_A 191 ----DDGPAAEIANLRQV-------LGPQAKIAADMH----------------WNQTPERALELIAEM-QPFDPWFAEAP 242 (388)
T ss_dssp ----TTCHHHHHHHHHHH-------HCTTSEEEEECC----------------SCSCHHHHHHHHHHH-GGGCCSCEECC
T ss_pred ----CHHHHHHHHHHHHH-------HCCCCEEECCCC----------------CCCCHHHHHHHHHHH-CCCCCCEEECC
T ss_conf ----25899999999986-------399976974778----------------888999999999874-45795254178
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 63104237998864238836850430000214888521003865223425453003899999999999879869995078
Q gi|254780670|r 286 MSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRS 365 (424)
Q Consensus 286 ~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRS 365 (424)
+..+|++++++|.++.. +-|.+|.-. ....-+++.++..+..-+.+++.- |-+|++++.+.+|+.+|..+++ |..
T Consensus 243 ~~~~d~~~~~~l~~~~~--iPIa~gE~~-~~~~~~~~~i~~~a~di~~~d~~~-GGit~~~kia~lA~~~gi~~~~-h~~ 317 (388)
T 2nql_A 243 VWTEDIAGLEKVSKNTD--VPIAVGEEW-RTHWDMRARIERCRIAIVQPEMGH-KGITNFIRIGALAAEHGIDVIP-HAT 317 (388)
T ss_dssp SCTTCHHHHHHHHTSCC--SCEEECTTC-CSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHHHHHHHHHTCEECC-CCC
T ss_pred CCHHHHHHHHHHHHCCC--CCCCCCCCC-CCHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHHHHHCCCEEEE-CCC
T ss_conf 88550999999986499--885257332-464567899975981587157645-8689999999999987983996-488
Q ss_pred CCCCHHHHHHHHHHHCCCHH
Q ss_conf 88723589989998199801
Q gi|254780670|r 366 GETEDHTIADLAVATNCGQI 385 (424)
Q Consensus 366 GETeD~~iaDLAVg~~a~~i 385 (424)
.++.=.+-+-+.++...+.+
T Consensus 318 ~~~~i~~aa~~h~~~~~~~~ 337 (388)
T 2nql_A 318 VGAGIFLAASLQASSTLSML 337 (388)
T ss_dssp SSCSHHHHHHHHHHTTCTTB
T ss_pred CCHHHHHHHHHHHHHHCCCC
T ss_conf 62099999999999855333