HHsearch results for GI: 254780670 and protein with PDBid: 2ovl_A
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.66 E-value=4.8e-13 Score=115.38 Aligned_cols=294 Identities=18% Similarity=0.212 Sum_probs=191.2
Q ss_pred CEEEEEEEE--------EEEE-CCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 910589986--------8860-797----842999999848976766344786647754676268986516804899999
Q gi|254780670|r 1 MFINDIIAR--------EVID-SRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIA 67 (424)
Q Consensus 1 m~I~~i~~r--------~IlD-SRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~ 67 (424)
++|++|+.+ .+.+ |+| ...|-|+|++++|..|.+-+.+. + +.+.. ...
T Consensus 2 ~~I~~i~~~~~~iPl~~p~~~~s~g~~~~~~~viV~i~t~~G~~G~GE~~~~---~-------------~~~~~---~~~ 62 (371)
T 2ovl_A 2 SLIERVRTDLYRIPLPTRLTDSTHGAMMDFELITVRIEDSDGATGLGYTYTV---N-------------HGGAA---VAT 62 (371)
T ss_dssp -CEEEEEEEEEEEEEEEEEBCTTTCCEEEEEEEEEEEEETTSCEEEEEEEEE---S-------------SSHHH---HHH
T ss_pred CCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEECC---C-------------CCHHH---HHH
T ss_conf 9488999999980289985425777188888999999989999899988798---8-------------86799---999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEE
Q ss_conf 998756789759885578988864653-0366432212322220244899875266349848882253245647543000
Q gi|254780670|r 68 FVNDEIRTALLGCDARDQLLIDKIMID-LDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMN 146 (424)
Q Consensus 68 ~in~~i~~~L~g~~~~dQ~~iD~~Li~-lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~N 146 (424)
.+++.+.|.|+|+++.+...+-+.|.. +.-..+. ..-..|+-|+.+|++-+.++..++|||+.|++.... .|++...
T Consensus 63 ~i~~~l~~~lig~d~~~~~~~~~~~~~~~~~~~~~-g~~~~A~said~AlwDl~gK~~~~Pl~~llG~~~~~-~~~~~~~ 140 (371)
T 2ovl_A 63 MVDKDLRGCLLGADAEQIEKIWQSMWWRLHYAGRG-GHATSAISAVDIALWDLKGIRARTPLWKLFGGYDPV-VPVYAGG 140 (371)
T ss_dssp HHHHTTHHHHTTSCTTCHHHHHHHHHHHTCTTCSS-THHHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCCSE-EEEEEEC
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC-CEEEECC
T ss_conf 99999899866998567999999999853321665-368899999999999997757448188956776556-2144114
Q ss_pred ECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 003664556776610256514887748999899999999999875200001---36765576448868468999999999
Q gi|254780670|r 147 ILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANS 223 (424)
Q Consensus 147 iinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eA 223 (424)
.. ...+..+..+ .+++.+ ++|+. ..+|. .+.++-++.+...
T Consensus 141 ~~--------------------~~~~~~~~~~-------~~~~~~-~~Gf~~~K~Kvg~--------~~~~~di~~v~~i 184 (371)
T 2ovl_A 141 ID--------------------LELPVADLKT-------QADRFL-AGGFRAIKMKVGR--------PDLKEDVDRVSAL 184 (371)
T ss_dssp CB--------------------TTSCHHHHHH-------HHHHHH-HTTCSCEEEECCC--------SSHHHHHHHHHHH
T ss_pred CC--------------------CCCCHHHHHH-------HHHHHH-HCCCCEEEECCCC--------CCHHHHHHHHHHH
T ss_conf 46--------------------7899999999-------999999-7388778304576--------6479999999999
Q ss_pred HHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCC
Q ss_conf 97538531110234311046532027851111468656878999999987654486997767631042379988642388
Q gi|254780670|r 224 IEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGS 303 (424)
Q Consensus 224 i~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~ 303 (424)
-+.. |.++.|.+|+ +.-++.++-+.+...| ++|++.+||+|+..+|+++..++.++.+
T Consensus 185 r~~~----g~~~~l~vDa----------------N~~~~~~~A~~~~~~l-~~~~~~~iEeP~~~~~~~~~~~l~~~~~- 242 (371)
T 2ovl_A 185 REHL----GDSFPLMVDA----------------NMKWTVDGAIRAARAL-APFDLHWIEEPTIPDDLVGNARIVRESG- 242 (371)
T ss_dssp HHHH----CTTSCEEEEC----------------TTCSCHHHHHHHHHHH-GGGCCSEEECCSCTTCHHHHHHHHHHHC-
T ss_pred HHHC----CCCCEEEECC----------------CCCCCHHHHHHHHHHH-HCCCCCEEECCCCCCCHHHHHHHHHCCC-
T ss_conf 9875----8762277636----------------7789999999999975-3139946864778537888999985247-
Q ss_pred CEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 36850430000214888521003865223425453003899999999999879869995078887235899899981
Q gi|254780670|r 304 NCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVAT 380 (424)
Q Consensus 304 ~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~ 380 (424)
+-|..|. -++++.-+.+.++.++++-+.+|+...|.+|++++.+.+|+++|+.+++ |..++ .-+|++.++
T Consensus 243 -ipia~dE-~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~i~~~A~~~gi~v~~-h~~~~----~~~h~~aa~ 312 (371)
T 2ovl_A 243 -HTIAGGE-NLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTS-HGVHD----LTVHALASV 312 (371)
T ss_dssp -SCEEECT-TCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEE-CSCHH----HHHHHHTSC
T ss_pred -CCCCCCC-CCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE-CCHHH----HHHHHHHHC
T ss_conf -8755873-0055888999997599888972823169889999999999986998982-58899----999999975