HHsearch results for GI: 254780670 and protein with PDBid: 2qdd_A
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structure initiative, nysgrc; 2.30A {Roseovarius nubinhibens ism} PDB: 3fvd_B
Probab=99.61 E-value=1.3e-12 Score=112.20 Aligned_cols=291 Identities=18% Similarity=0.199 Sum_probs=190.2
Q ss_pred CEEEEEEEEEE--------EECCCC------CEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHH
Q ss_conf 91058998688--------607978------4299999984897676634-47866477546762689865168048999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRGS------PTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKA 65 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG~------PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~A 65 (424)
|+|++|..+.+ ..|.|. .++-|+|.+++|..|.+-+ |.+-+++. .....
T Consensus 3 MKI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~lV~i~td~G~~G~GE~~~~~~~~~~----------------~~~~~ 66 (378)
T 2qdd_A 3 LRITRLTVFHLDLPLAKPYWLSGGRLKFDRLDSTYLRIDTDEGVTGWGEGCPWGHSYLP----------------AHGPG 66 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCC--CEEEEEEEEEEEEEETTSCEEEEEECCSTTTSSS----------------CCHHH
T ss_pred CEEEEEEEEEEEEECCCCEEECCCEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCC----------------CCHHH
T ss_conf 78969999999973578657138648865678999999989999899840478776642----------------30899
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCE
Q ss_conf 99998756789759885578988864653036643221232222024489987526634984888225324564754300
Q gi|254780670|r 66 IAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLM 145 (424)
Q Consensus 66 v~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~ 145 (424)
+..+-+.+.|.|+|+++.+...+.+.|...-. ...-++-|+.+|++-+.++..++|||+.|++..... +|..
T Consensus 67 ~~~~~~~l~~~l~g~~~~~~~~~~~~~~~~~~------~~~~a~said~AlwDl~gK~~~~pv~~llGg~~~~~--i~~~ 138 (378)
T 2qdd_A 67 LRAGIATLAPHLLGLDPRSLDHVNRVMDLQLP------GHSYVKSPIDMACWDILGQVAGLPLWQLLGGEAATP--VPIN 138 (378)
T ss_dssp HHHHHHHHHHHHTTCCTTCHHHHHHHHHHHSC------SCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCSSCCC--EEBE
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC--EEEE
T ss_conf 99999999998669993049999999986465------407899999999999999973996202137776641--0255
Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 00036645567766102565148877489998999999999998752000013---676557644886846899999999
Q gi|254780670|r 146 NILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIAN 222 (424)
Q Consensus 146 NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~e 222 (424)
..+.+ .+..+.+.. ..+.+ ++|+.+ .+|. .+.++-++.+..
T Consensus 139 ~~~~~--------------------~~~~~~~~~-------~~~~~-~~G~~~~K~kvg~--------~~~~~d~~~v~~ 182 (378)
T 2qdd_A 139 SSIST--------------------GTPDQMLGL-------IAEAA-AQGYRTHSAKIGG--------SDPAQDIARIEA 182 (378)
T ss_dssp EEECS--------------------CCHHHHHHH-------HHHHH-HHTCCEEEEECCS--------SCHHHHHHHHHH
T ss_pred ECCCC--------------------CCHHHHHHH-------HHHHH-HCCCCEECCCCCC--------CCHHHHHHHHHH
T ss_conf 13457--------------------987888888-------88876-3476210356799--------998999999999
Q ss_pred HHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 99753853111023431104653202785111146865687899999998765448699776763104237998864238
Q gi|254780670|r 223 SIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIG 302 (424)
Q Consensus 223 Ai~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g 302 (424)
.-+. .|.++.|.+|+- ...|.++-+++...| ++|- +||+|+..+|+.+.. ..+.+
T Consensus 183 ir~~----~g~~~~l~vDaN----------------~~w~~~~A~~~~~~l-~~~~--~iEeP~~~~d~~~~~--~~~~~ 237 (378)
T 2qdd_A 183 ISAG----LPDGHRVTFDVN----------------RAWTPAIAVEVLNSV-RARD--WIEQPCQTLDQCAHV--ARRVA 237 (378)
T ss_dssp HHHS----CCTTCEEEEECT----------------TCCCHHHHHHHHTSC-CCCC--EEECCSSSHHHHHHH--HTTCC
T ss_pred HHHH----CCCCCEEEECCC----------------CCCCHHHHHHHHHHH-HHCC--CCCCCCCCHHHHHHH--HHHCC
T ss_conf 8764----698775871267----------------779999999999987-5137--733663202467788--88518
Q ss_pred CCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 836850430000214888521003865223425453003899999999999879869995078887235899--899981
Q gi|254780670|r 303 SNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 303 ~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
+-|..|.- +.+..-.+..++.++++.+.+|+.-+|-+|++++.+++|+.+|+.+++. ..+|+.=...+ |||.++
T Consensus 238 --~pia~~E~-~~~~~~~~~~~~~~a~d~~~~d~~~~GGit~~~~i~~~a~~~g~~~~~~-~~~~~~i~~~a~~hlaaa~ 313 (378)
T 2qdd_A 238 --NPIMLDEC-LHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIE-DVGGTALADTAALHLAAST 313 (378)
T ss_dssp --SCEEECTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC-CSSCCHHHHHHHHHHHHTS
T ss_pred --CCCCCCCC-CCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHHC
T ss_conf --99667875-4423455668765974799825756774999999999999856472158-8764099999999999968