HHsearch results for GI: 254780670 and protein with PDBid: 3bjs_A
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein structure initiative; 2.70A {Polaromonas SP}
Probab=99.71 E-value=6.7e-15 Score=129.09 Aligned_cols=298 Identities=17% Similarity=0.219 Sum_probs=196.0
Q ss_pred CEEEEEEEEEEE----------ECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHH
Q ss_conf 910589986886----------0797----84299999984897676634478664775467626898651680489999
Q gi|254780670|r 1 MFINDIIAREVI----------DSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAI 66 (424)
Q Consensus 1 m~I~~i~~r~Il----------DSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av 66 (424)
|+|++|.+..+- .++| +.+|=|+|+|++|.+|.+-+..+.+ .....
T Consensus 39 MkIt~Ie~~~v~~plp~~~~~~~~~g~~~~r~~vlVri~td~G~~G~GE~~p~~~--------------------~~~~~ 98 (428)
T 3bjs_A 39 MKITKINAIPLSYRLPEGKTVTMGVGSTIKRDAIIIRVETSEGITGYGEAHPGRS--------------------PGAIT 98 (428)
T ss_dssp CBEEEEEEEEEEEECC---CCBCSSCBCSEEEEEEEEEEETTSCEEEEEECCTTC--------------------HHHHH
T ss_pred CEEEEEEEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCC--------------------HHHHH
T ss_conf 8786999999754478887514333628985799999998999989997147888--------------------79999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 9998756789759885578988864653036643221232--22202448998752663498488822532456475430
Q gi|254780670|r 67 AFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGA--NAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPL 144 (424)
Q Consensus 67 ~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGa--NailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~ 144 (424)
..+++.++|.|+|+++.+...+-+.|....-. .....++ .++-|+-+|++-+.++..++|||+.|++... .+|...
T Consensus 99 ~~i~~~l~p~liG~d~~~~~~l~~~l~~~~~~-~~~~~~~~~~A~saId~ALwDl~gK~~~~Pv~~LLGg~~~-~i~~~a 176 (428)
T 3bjs_A 99 SLIHNTIAPMLIGMKATDCVGAWQRVHRMQLS-SHGLGAGAALAISGIDMALWDIRGKAANMPLYELLGGSKR-RIPAYA 176 (428)
T ss_dssp HHHHHTTTTTTTTSBTTCHHHHHHHHHHHTTT-TTSCTHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCCC-CEEEEE
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC-CCEEEE
T ss_conf 99999999997799815499999999986653-0476427799999999999999998842239998088755-421454
Q ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 00003664556776610256514887748999899999999999875200001---367655764488684689999999
Q gi|254780670|r 145 MNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIA 221 (424)
Q Consensus 145 ~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~ 221 (424)
..+. .+..+-.+..+. .++.+ ++|+. ..+|. +.+.-++.+.
T Consensus 177 ~~~~-------------------~~~~~~e~~~~~-------~~~~~-~~Gf~~~KiKvg~---------~~~~D~~~v~ 220 (428)
T 3bjs_A 177 GGIA-------------------LGYQPKESLAEE-------AQEYI-ARGYKALKLRIGD---------AARVDIERVR 220 (428)
T ss_dssp ESSC-------------------SCSCCHHHHHHH-------HHHHH-HHTCSEEEEECCS---------CHHHHHHHHH
T ss_pred ECCC-------------------CCCCCHHHHHHH-------HHHHH-HCCCCEEEECCCC---------CHHHHHHHHH
T ss_conf 1133-------------------455899999999-------99998-6399748961798---------7188999999
Q ss_pred HHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHC
Q ss_conf 99975385311102343110465320278511114686568789999999876544869977676310423799886423
Q gi|254780670|r 222 NSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKI 301 (424)
Q Consensus 222 eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~ 301 (424)
..-+.. |.++.|.+|+ ++ -.|.++-+.+...| ++|.+.++|+|+..+|+++..++.+..
T Consensus 221 ~iR~~~----g~~~~l~vDa-------N~---------~w~~~~A~~~~~~L-~~~~l~~iEeP~~~~d~~~~~~l~~~~ 279 (428)
T 3bjs_A 221 HVRKVL----GDEVDILTDA-------NT---------AYTMADARRVLPVL-AEIQAGWLEEPFACNDFASYREVAKIT 279 (428)
T ss_dssp HHHHHH----CTTSEEEEEC-------TT---------CCCHHHHHHHHHHH-HHTTCSCEECCSCTTCHHHHHHHTTTC
T ss_pred HHHHHC----CCCCEEEEEC-------CC---------CCCHHHHHHHHHHH-HCCCCCCEECCCCCCCHHHHHHHHHCC
T ss_conf 999971----9998299988-------99---------86568899989987-404765233686854789999999608
Q ss_pred CCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH--HHHHHH
Q ss_conf 883685043000021488852100386522342545300389999999999987986999507888723589--989998
Q gi|254780670|r 302 GSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTI--ADLAVA 379 (424)
Q Consensus 302 g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~i--aDLAVg 379 (424)
+ .+-|.+|. .+.++.-+.+.|+.++++.+-+|+...|-+|++++.+++|+.+|..++ .|-. ++.=... +||+.+
T Consensus 280 ~-~iPIa~dE-~~~~~~d~~~~i~~~a~dii~~d~~~~GGit~~~~i~~~A~~~gi~v~-~h~~-~~~i~~aa~lhl~aa 355 (428)
T 3bjs_A 280 P-LVPIAAGE-NHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMASAYRIPIN-AHSS-ATGLNHAATIHFLAA 355 (428)
T ss_dssp S-SSCEEECT-TCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHHHHTTCCBC-CBCC-SSHHHHHHHHHHHHH
T ss_pred C-CCEEEECC-CCCCHHHHHHHHHCCCCCEECCCCCEECCHHHHHHHHHHHHHCCCEEE-ECCC-CCHHHHHHHHHHHHH
T ss_conf 9-98187177-678999999999749942663685456979999999999998799899-6889-618999999999997
Q ss_pred HC
Q ss_conf 19
Q gi|254780670|r 380 TN 381 (424)
Q Consensus 380 ~~ 381 (424)
+.
T Consensus 356 ~~ 357 (428)
T 3bjs_A 356 TE 357 (428)
T ss_dssp CT
T ss_pred CC
T ss_conf 89