HHsearch results for GI: 254780670 and protein with PDBid: 3cyj_A

>3cyj_A Mandelate racemase/muconate lactonizing enzyme- like protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=99.65  E-value=1.9e-13  Score=118.41  Aligned_cols=283  Identities=16%  Similarity=0.139  Sum_probs=180.7

Q ss_pred             EEEECCCC----CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             88607978----42999999848976766344786647754676268986516804899999998756789759885578
Q gi|254780670|r   10 EVIDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQ   85 (424)
Q Consensus        10 ~IlDSRG~----PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ   85 (424)
                      -+-+|+|.    +.|-|++.+ +|..|.+-++.+.                    .+.   ..+++.++|.|+|+|+.+.
T Consensus        23 P~~~~~~~~~~~~~v~v~i~~-dG~~G~GE~~~~~--------------------~~~---~~i~~~l~p~l~G~d~~~~   78 (372)
T 3cyj_A           23 PESDGTLQWDSTTMILVEAHG-GGRKGLGYTYGDV--------------------SVG---RFVESKLAGVAEGSDALSP   78 (372)
T ss_dssp             EEEETTEEEEEEEEEEEEEEE-TTEEEEEEEESCT--------------------HHH---HHHHHHTHHHHTTSBTTCH
T ss_pred             CEECCCCEEEEEEEEEEEEEE-CCEEEEEEEECHH--------------------HHH---HHHHHHHHHHHCCCCCCCH
T ss_conf             862556179778999999994-8929999987878--------------------999---9999999999769996799


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEE
Q ss_conf             98886465303664322123222202448998752663498488822532456475430000036645567766102565
Q gi|254780670|r   86 LLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMI  165 (424)
Q Consensus        86 ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmI  165 (424)
                      ..+-+.|....-......+...|+-|+.+|++-+.++..++|||+.|++.. ..+|+.......+               
T Consensus        79 ~~i~~~l~~~~~~~g~~g~~~~A~said~AlwDl~gK~~~~Pv~~LLGg~~-~~i~~y~~~~~~~---------------  142 (372)
T 3cyj_A           79 PAVWARMQAAIRNAGRPGVGAMAVSAVDIALWDLKARLLGLPLADALPRFH-AEVPVYGSGGFTS---------------  142 (372)
T ss_dssp             HHHHHHHHHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHTTCBHHHHSCCCC-SSEEEEEECCCTT---------------
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC-CCEEEECCCCCCC---------------
T ss_conf             999999999887516752789999999999999987665997254157644-4222101356678---------------


Q ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHH
Q ss_conf             148877489998999999999998752000013---67655764488684689999999999753853111023431104
Q gi|254780670|r  166 MPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCA  242 (424)
Q Consensus       166 iP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~A  242 (424)
                           .+-.+..       ..++... ++|+.+   .+|.      ..+...+.++.+.++       .|.++.|.+|+.
T Consensus       143 -----~~~~~~~-------~~~~~~~-~~Gf~~~K~k~g~------~~~~d~~~i~~ir~~-------~g~~~~l~vDaN  196 (372)
T 3cyj_A          143 -----YPLRRLQ-------EQLGGWA-AAGIPRVKMKVGR------EPEKDPERVRAAREA-------IGESVELMVDAN  196 (372)
T ss_dssp             -----SCHHHHH-------HHHHHHH-HTTCCEEEEECCS------SGGGHHHHHHHHHHH-------HCTTSEEEEECT
T ss_pred             -----CCHHHHH-------HHHHHHH-HHCCCCCCCCCCC------CCHHHHHHHHHHHHH-------HCCCCEEEEECC
T ss_conf             -----7678999-------9999999-7266642344467------806789999999998-------298946986053


Q ss_pred             HHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHH
Q ss_conf             65320278511114686568789999999876544869977676310423799886423883685043000021488852
Q gi|254780670|r  243 ASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHK  322 (424)
Q Consensus       243 Asefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~  322 (424)
                                      ..++.++-+.+...+.++|++.++|||+..+|+++.++|.++..-.+- ++.+....+....  
T Consensus       197 ----------------~~~~~~~A~~~~~~~l~~~~l~~~EeP~~~~d~~~~~~l~~~~~~~i~-~~e~~~~~~~~~~--  257 (372)
T 3cyj_A          197 ----------------GAYTRKQALYWAGAFAREAGISYLEEPVSSEDREGLRLLRDRGPGGVA-IAAGEYEWTLPQL--  257 (372)
T ss_dssp             ----------------TCSCHHHHHHHHHHHHHHHCCCEEECSSCTTCHHHHHHHHHHSCTTCE-EEECTTCCSHHHH--
T ss_pred             ----------------CCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCCCHHHHHHH--
T ss_conf             ----------------445889999988654203203324689981029999999985678753-2156521445899--


Q ss_pred             HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf             100386522342545300389999999999987986999507888723589989998199
Q gi|254780670|r  323 GINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNC  382 (424)
Q Consensus       323 gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a  382 (424)
                      .+..++++.+-+|+..+|-+|+++..+.+|+.+|..++. |-+    -..-++|+.++..
T Consensus       258 ~~~~~~~d~~~~d~~~~GGit~~~ki~~~a~~~gi~v~~-h~~----~~a~~hl~~a~~~  312 (372)
T 3cyj_A          258 HDLAGCVDILQADVTRCGGITGLLRVDGICRGHQIPFSA-HCA----PAVSAHACCAVES  312 (372)
T ss_dssp             HHHHTTCSEEEECTTTTTHHHHHTTHHHHHHHHTCCEEE-CSC----HHHHHHHGGGCTT
T ss_pred             HHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEE-CCH----HHHHHHHHHHHHC
T ss_conf             998072300003861269878999999999985996985-679----9999999998631