HHsearch results for GI: 254780670 and protein with PDBid: 3my9_A
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=99.73 E-value=1e-15 Score=135.15 Aligned_cols=300 Identities=17% Similarity=0.197 Sum_probs=197.7
Q ss_pred CEEEEEEEEEE---E-----ECCC-----CCEEEEEEEECCCCEEEEECCCC-CCCCCCEEEEECCCCCCCCCCHHHHHH
Q ss_conf 91058998688---6-----0797-----84299999984897676634478-664775467626898651680489999
Q gi|254780670|r 1 MFINDIIAREV---I-----DSRG-----SPTIEVDVCLEDGSTGRAMVPSG-ASTGIHEAFELRDQEKRYFGKGVLKAI 66 (424)
Q Consensus 1 m~I~~i~~r~I---l-----DSRG-----~PTvEvev~~~~g~~gra~~PSG-aStG~~Ea~elrD~~~~~~G~gV~~Av 66 (424)
++|++|....+ | .+.| ..++=|+|++++|..|.+-++.. ..++. ...+.
T Consensus 6 ~~I~~i~~~~~~~Pl~~~~~~~~~~~~~~~~~~lV~i~t~~G~~G~GE~~p~~~~~~~-----------------~~~~~ 68 (377)
T 3my9_A 6 SVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEVFTGT-----------------PEAAF 68 (377)
T ss_dssp CBEEEEEEEEEEECEEC----------CCEEEEEEEEEETTSCEEEEEECCC-----C-----------------HHHHH
T ss_pred CEEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEEEEEEECCCCEEEEECCCCCCCCCC-----------------HHHHH
T ss_conf 6787999999983323651766107953268999999989999999746667777878-----------------99999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCE
Q ss_conf 9998756789759885578988864653-036643221232222024489987526634984888225324564754300
Q gi|254780670|r 67 AFVNDEIRTALLGCDARDQLLIDKIMID-LDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLM 145 (424)
Q Consensus 67 ~~in~~i~~~L~g~~~~dQ~~iD~~Li~-lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~ 145 (424)
..+++.++|.|+|+++.+...+=..|.. ..+ -..+..|+.+|++-+.++..++|||+.|++...... |..
T Consensus 69 ~~i~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-------~~~a~said~AlwDl~gk~~~~pl~~lLG~~~~~~~--~~~ 139 (377)
T 3my9_A 69 SALDIYLRPLILGAPIKRVRELMARMDKMLVG-------HGEAKAAVEMALLDILGKATGLSVADLLGGRVRDRI--PLS 139 (377)
T ss_dssp HHHHTTTHHHHTTCBTTCHHHHHHHHHHHSCS-------CHHHHHHHHHHHHHHHHHHHTCBTTGGGTCCSCSEE--EBC
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-------CHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCE--EEE
T ss_conf 99999988987699866799999876542247-------578999999999997334159713540467755312--554
Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 00036645567766102565148877489998999999999998752000013676557644886846899999999997
Q gi|254780670|r 146 NILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 146 NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
..+.+ .+..+.... .+..+ ++|+.+-.-. +......+-+..+....+
T Consensus 140 ~~~~~--------------------~~~~~~~~~-------~~~~~-~~g~~~~kiK-----v~~~~~~~d~~~i~~i~~ 186 (377)
T 3my9_A 140 FSIAD--------------------PDFDADLER-------MRAMV-PAGHTVFKMK-----TGVKPHAEELRILETMRG 186 (377)
T ss_dssp EEECC--------------------SSHHHHHHH-------HHHHT-TTTCCEEEEE-----CSSSCHHHHHHHHHHHHH
T ss_pred EECCC--------------------CCHHHHHHH-------HHHHH-HCCCCCCCCC-----CCCCCCHHHHHHHHHHHH
T ss_conf 20257--------------------737788999-------99987-5055200134-----567660899999999998
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
.. |.++.|.+|+ ++. +|.++-+++... +++|.+.++|+||..+|++++.+|.+..+ +
T Consensus 187 ~~----~~~~~l~vDa-------N~~---------~~~~~a~~~~~~-l~~~~l~~iEeP~~~~~~~~~~~L~~~~~--i 243 (377)
T 3my9_A 187 EF----GERIDLRLDF-------NQA---------LTPFGAMKILRD-VDAFRPTFIEQPVPRRHLDAMAGFAAALD--T 243 (377)
T ss_dssp HH----GGGSEEEEEC-------TTC---------CCTTTHHHHHHH-HHTTCCSCEECCSCTTCHHHHHHHHHHCS--S
T ss_pred HC----CCCEEEEECC-------CCC---------CCHHHHHHHHHH-HHHHHCCCCHHCCCCCCHHHHHHHHHCCC--C
T ss_conf 62----8853377064-------558---------999999999766-66540012011277348777568885279--8
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCH
Q ss_conf 8504300002148885210038652234254530038999999999998798699950788872358998999819980
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQ 384 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~ 384 (424)
.|.+|. .+.++..+.+.++.++++.+.+|+..+|.+|++++.+++|+.+|+.++++| ..|+.=.+-+.+.++...+.
T Consensus 244 pia~dE-s~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~~s~i~~aa~~hlaaa~p~ 320 (377)
T 3my9_A 244 PILADE-SCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGT-LWEGGIALAAGTQLIAATPG 320 (377)
T ss_dssp CEEEST-TCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCE-ECCSHHHHHHHHHHHHTCTT
T ss_pred CCCCCE-EEEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECC-CCCCHHHHHHHHHHHHHCCC
T ss_conf 814761-476301255666427775126353324889999999989998699888689-88779999999999996889