HHsearch results for GI: 254780670 and protein with PDBid: 3n4e_A
>3n4e_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics; HET: MSE; 2.40A {Paracoccus denitrificans}
Probab=99.74 E-value=3.5e-14 Score=123.77 Aligned_cols=307 Identities=16% Similarity=0.187 Sum_probs=195.2
Q ss_pred CEEEEEEEEEEEECCCC----CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 91058998688607978----42999999848976766344786647754676268986516804899999998756789
Q gi|254780670|r 1 MFINDIIAREVIDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTA 76 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~----PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~ 76 (424)
|+|++|....+-=++|. ++|=|+|++++|..|.+-+... .+ + ...+..+.+.++|.
T Consensus 3 mkI~~ie~~~~~~~~~~~~~~~~~~Vri~td~G~~G~GE~~p~--~~---------------~---~~~~~~i~~~l~~~ 62 (393)
T 3n4e_A 3 LKIAKVEALSVAMGDGTGWMPTSAFVRITAEDGTVGWGEASPM--LG---------------G---IASLGVVARDIAPF 62 (393)
T ss_dssp CBEEEEEEEEEECC------CEEEEEEEEETTSCEEEEEECCG--GG---------------G---HHHHHHHHHTTHHH
T ss_pred CEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEECCCC--CC---------------C---HHHHHHHHHHHHHH
T ss_conf 4699999999657788850453699999979999999826577--77---------------2---89999999999999
Q ss_pred HCCCCHHHHHHHHH-HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 75988557898886-46530366432212322220244899875266349848882253245647543000003664556
Q gi|254780670|r 77 LLGCDARDQLLIDK-IMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHAD 155 (424)
Q Consensus 77 L~g~~~~dQ~~iD~-~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~ 155 (424)
|+|+++.+...+=+ ++..+-.. ....+...++-|+-+|++-+.++..++|||+.|++..... +|+...++|.
T Consensus 63 lig~~~~~~~~~~~~~~~~~~~~-~~~g~~~~a~said~AlwDl~gK~~g~pl~~lLGG~~r~~--i~~y~s~~~~---- 135 (393)
T 3n4e_A 63 LEGQEVLDHAVLLDRMMHRLVKL-GPEGIATAALAACDIALWDLKGKLLGQPIYKLLGGAWRTR--LPCYSSIGGN---- 135 (393)
T ss_dssp HTTSBGGGHHHHHHHHHHHSGGG-CCTTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSE--EEEEEEECCC----
T ss_pred HCCCCCCCHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC--CCCEEECCCC----
T ss_conf 77999302999999999877641-7741578999999999999998763998411058856655--5311212677----
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 7766102565148877489998999999999998752000013676557644886-846899999999997538531110
Q gi|254780670|r 156 NALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNL-KTADSALDLIANSIEKAGYNAGKD 234 (424)
Q Consensus 156 ~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~-~~~eeaL~ll~eAi~~aGy~~g~d 234 (424)
......+.+....+-+. ..++..-...-|++.... .+.++-++.+...-+. .|.+
T Consensus 136 -------------~~~~~~~~~~~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~di~~i~~ir~~----~g~~ 191 (393)
T 3n4e_A 136 -------------AARSVDEVVREVARRVE-------AEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVREL----LGPD 191 (393)
T ss_dssp -------------SSSCHHHHHHHHHHHHH-------HHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHH----HCSS
T ss_pred -------------CCCCHHHHHHHHHHHHH-------HHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH----HCCC
T ss_conf -------------52111778888888998-------73223353114764343433305579999999998----3998
Q ss_pred HHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEE
Q ss_conf 23431104653202785111146865687899999998765448699776763104237998864238836850430000
Q gi|254780670|r 235 LLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFV 314 (424)
Q Consensus 235 i~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~v 314 (424)
+.|.+|+ +...+.++-+.+... +++|++.++|+|+..+|+++..+|.++.+ +.|.+|.- +
T Consensus 192 ~~l~vDa----------------n~~~~~~~A~~~~~~-l~~~~~~~iEeP~~~~~~~~~~~l~~~~~--ipIa~gE~-~ 251 (393)
T 3n4e_A 192 AVIGFDA----------------NNGYSVGGAIRVGRA-LEDLGYSWFEEPVQHYHVGAMGEVAQRLD--ITVSAGEQ-T 251 (393)
T ss_dssp CCEEEEC----------------TTCCCHHHHHHHHHH-HHHTTCSEEECCSCTTCHHHHHHHHHHCS--SEEEBCTT-C
T ss_pred CEEEECC----------------CCCCCHHHHHHHHHH-HHHCCCCEEECCCCCCCHHHHHHHHHCCC--CCCCCCCC-C
T ss_conf 4698446----------------668999999999999-98618525636876224578998742478--33117888-7
Q ss_pred CCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 2148885210038652234254530038999999999998798699950788872358998999819
Q gi|254780670|r 315 TNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATN 381 (424)
Q Consensus 315 Tn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~ 381 (424)
.+..-++..+.. .++.+-+|+..+|-+|++++.+++|+.+|..+ +.|.. ++.=.+.+.+.++..
T Consensus 252 ~~~~~~~~~i~~-~~d~~~~d~~~~GGit~~~~i~~lA~~~gi~v-~~h~~-~~~i~~~a~lhl~aa 315 (393)
T 3n4e_A 252 YTLQALKDLILS-GVRMVQPDIVKMGGITGMMQCAALAHAHGVEF-VPHQT-QPGVGHFANIHVLST 315 (393)
T ss_dssp CSHHHHHHHHHH-TCCEECCCTTTTTHHHHHHHHHHHHHHHTCEE-CCCCC-CSSHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHH-CCCCCCCCCHHCCCHHHHHHHHHHHHHCCCEE-EECCC-CHHHHHHHHHHHHHH
T ss_conf 899999999864-64523553020477899999999999879869-87888-409999999999985