RPSBLAST alignment of GI: 254780670 and protein with PDBid: 1mdl

>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A Length = 359
 Score = 38.4 bits (88), Expect = 0.004
 Identities = 54/386 (13%), Positives = 115/386 (29%), Gaps = 93/386 (24%)

Query: 1   MFINDIIAREV--------IDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAF 48
           + I  +  R V          + G+    P + +D+    G  G + + +          
Sbjct: 4   VLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFA---------- 53

Query: 49  ELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANA 108
                    +    LK++  + D++   ++       + ++ ++         + L   A
Sbjct: 54  ---------YTPVALKSLKQLLDDMAAMIVNEPL-APVSLEAMLAKRFCLAGYTGLIRMA 103

Query: 109 ILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPV 168
             G+ +A   A  +    PL K LG  +  +      ++    +  + A+   E     V
Sbjct: 104 AAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAV 163

Query: 169 GAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAG 228
                  A+     V  ++++ +                                     
Sbjct: 164 KTRIGYPALDQDLAVVRSIRQAV------------------------------------- 186

Query: 229 YNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSE 288
              G D  I +D   S                      A   +  + Q  +  IE+   +
Sbjct: 187 ---GDDFGIMVDYNQS-----------------LDVPAAIKRSQALQQEGVTWIEEPTLQ 226

Query: 289 DDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNT 348
            D+ G + + +K+    Q+         PE + K ++       +    +IG V+  +  
Sbjct: 227 HDYEGHQRIQSKLNVPVQM---GENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRA 283

Query: 349 IEKAQMAGYPSIISHRSGETEDHTIA 374
              AQ  G P + SH   E   H +A
Sbjct: 284 SALAQQFGIP-MSSHLFQEISAHLLA 308