RPSBLAST alignment of GI: 254780670 and protein with PDBid: 1mdl
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A Length = 359
Score = 38.4 bits (88), Expect = 0.004
Identities = 54/386 (13%), Positives = 115/386 (29%), Gaps = 93/386 (24%)
Query: 1 MFINDIIAREV--------IDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAF 48
+ I + R V + G+ P + +D+ G G + + +
Sbjct: 4 VLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFA---------- 53
Query: 49 ELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANA 108
+ LK++ + D++ ++ + ++ ++ + L A
Sbjct: 54 ---------YTPVALKSLKQLLDDMAAMIVNEPL-APVSLEAMLAKRFCLAGYTGLIRMA 103
Query: 109 ILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPV 168
G+ +A A + PL K LG + + ++ + + A+ E V
Sbjct: 104 AAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAV 163
Query: 169 GAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAG 228
A+ V ++++ +
Sbjct: 164 KTRIGYPALDQDLAVVRSIRQAV------------------------------------- 186
Query: 229 YNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSE 288
G D I +D S A + + Q + IE+ +
Sbjct: 187 ---GDDFGIMVDYNQS-----------------LDVPAAIKRSQALQQEGVTWIEEPTLQ 226
Query: 289 DDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNT 348
D+ G + + +K+ Q+ PE + K ++ + +IG V+ +
Sbjct: 227 HDYEGHQRIQSKLNVPVQM---GENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRA 283
Query: 349 IEKAQMAGYPSIISHRSGETEDHTIA 374
AQ G P + SH E H +A
Sbjct: 284 SALAQQFGIP-MSSHLFQEISAHLLA 308