RPSBLAST alignment of GI: 254780670 and protein with PDBid: 3ddm

>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica} Length = 392

 Score = 47.0 bits (111), Expect = 8e-06
 Identities = 49/356 (13%), Positives = 81/356 (22%), Gaps = 85/356 (23%)

Query: 7   IAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAI 66
            +   +  R  P + V+V   DG+ G   V         E                    
Sbjct: 30  TSFGTMHDR--PAVLVEVEDSDGAVGWGEVWCNFPACGAEHRA----------------- 70

Query: 67  AFVNDEIRTALLGCDARDQL----LIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQ 122
             V   +   L      D       ++     L     +    A AI G+ +A+   AA+
Sbjct: 71  RLVETVLAPLLTARAFADPAQAFAHLEARTAVLAIQTGEPGPLAQAIAGLDIALCDLAAR 130

Query: 123 TSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAE 182
            +  PL+ +LGG    I       +   GI+ +N  D                  R  AE
Sbjct: 131 RAGQPLWAWLGGSGDRI------GVYASGINPENPED---------------VVARKAAE 169

Query: 183 VFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCA 242
            +   K ++                      D A D+            G    +  D  
Sbjct: 170 GYRAFKLKVG--------------------FDDARDVRN--ALHVRELLGAATPLMADA- 206

Query: 243 ASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIG 302
                          N              L      +  E   ++     W  L     
Sbjct: 207 ---------------NQGWDLPRARQMAQRLGPAQLDWLEEPLRADRPAAEWAELAQAAP 251

Query: 303 SNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYP 358
                +     +         +       +     + G  S  L        AG  
Sbjct: 252 ---MPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLR 304