HHsearch alignment for GI: 254780673 and conserved domain: COG4231
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion].
Probab=98.72 E-value=1.7e-06 Score=65.12 Aligned_cols=254 Identities=24% Similarity=0.289 Sum_probs=158.2
Q ss_pred HHHCCC---CCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf 754081---11011666627899899998871886445666667899999999987886742117767888799830244
Q gi|254780673|r 181 LQEFGC---ERVIDTPITEHGFAGIGIGASFAGLKPIVEFMTFNFAMQAIDQIINSAAKTRYMSGGQITTSIVFRGPNGA 257 (467)
Q Consensus 181 ~~~fg~---~R~~d~pi~E~~~~G~a~G~A~~G~~Piv~~~~~~f~~~a~dqi~n~~ak~~~~~gg~~~~p~v~r~p~G~ 257 (467)
T Consensus 49 la~~~~~l~~vy~e~s~NEkvA~e~a~GA~~~G~ral~~-mKhVGlNvAsDpl~s~a----y--~G-v~GGlviv~---- 116 (640)
T COG4231 49 LAKAKKILGDVYFEWSLNEKVALETAAGASYAGVRALVT-MKHVGLNVASDPLMSLA----Y--AG-VTGGLVIVV---- 116 (640)
T ss_pred HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEE-ECCCCCCCCHHHHHHHH----H--CC-CCCCEEEEE----
T ss_conf 998654307389970654899999998765337002687-12356452202555543----0--37-666089998----
Q ss_pred CCCCCHHHHHHH--HHHHHHHCCCEEEEEECCHHCCCHHHHHHH----CCCCEEEECC-CCCCCC-----C---CC--CC
Q ss_conf 576444433216--887632203138665221000105556541----3783476402-123333-----3---45--33
Q gi|254780673|r 258 AARVAAQHSQCY--AAWYSHVPGLKVVIPYTASDAKGLLKAAIR----DPNPVIFLEN-EILYGS-----S---FE--VP 320 (467)
Q Consensus 258 ~~~~g~~Hs~~~--~~~~~~iPgl~V~~P~~~~d~~~ll~~ai~----~~~Pvi~le~-~~ly~~-----~---~~--~p 320 (467)
T Consensus 117 aDDpg~~SSqneqdsr~y~~~a~iPvLeP~d~Qea~d~~~~afelSe~~~~pVilr~ttr~~h~~~~V~~~~~~~~~~~~ 196 (640)
T COG4231 117 ADDPGMHSSQNEQDSRAYGKFALIPVLEPSDPQEAYDYVKYAFELSEKSGLPVILRTTTRVSHSRGDVEVGLNRRPIVEP 196 (640)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEECCCCCCCCCC
T ss_conf 16988644535667689888507612068986999999999987778738978999986430221028824666787765
Q ss_pred CCCCEECCCCC-------------------------------EEEEECC--CCCEEEEHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 46631214431-------------------------------1444316--87458602578888888875310046752
Q gi|254780673|r 321 MVDDLVIPIGR-------------------------------ARIHRQG--SDVTIISFGIGMTYATKAAIELEKNGIDA 367 (467)
Q Consensus 321 ~~~~~~~p~Gk-------------------------------~~i~~~G--~ditii~~G~~~~~a~~aa~~L~~~gi~~ 367 (467)
T Consensus 197 ~~~~~~k~~~~~V~~p~~~~~~~~~~l~~k~~a~~~~~~~~~~n~v~~~~~~~lGII~~G~ay~yVkeAl~---~lgl~~ 273 (640)
T COG4231 197 EDEFFIKDPGRYVRVPANALRHRHRKLLEKWEAAEEFINANPLNRVEGSDDAKLGIIASGIAYNYVKEALE---DLGLDD 273 (640)
T ss_pred CCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHH---HCCCCC
T ss_conf 21243478663230674211256788999999999998648656313688785689935721799999999---758874
Q ss_pred EEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCC-CCCCHHHHHHCC
Q ss_conf 7973300685799999999987198999957887676789999999996776428982997177788-888966765608
Q gi|254780673|r 368 ELIDLRTIRPMDWQTIFESVKKTGRLVTVEEGYPQSSVGSTIANQVQRKVFDYLDAPILTITGRDVP-MPYAANLEKLAL 446 (467)
Q Consensus 368 ~vid~r~l~Pld~~~i~~sv~kt~~~i~vee~~~~gg~g~~i~~~i~e~~f~~L~~p~~ri~~~d~p-~P~~~~le~~~~ 446 (467)
T Consensus 274 ~~lklg~~~Plp~~~i~~F~~g~~~vlVVEE~~P---~iE---~qv~~~l~~--~~~~~~v~GKd~gllP~------~GE 339 (640)
T COG4231 274 ELLKLGTPYPLPEQLIENFLKGLERVLVVEEGEP---FIE---EQVKALLYD--AGLPVEVHGKDEGLLPM------EGE 339 (640)
T ss_pred EEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCH---HHH---HHHHHHHHH--CCCCEEEECCCCCCCCC------CCC
T ss_conf 1789458757888999999826847999955870---489---999999875--48854740344564576------566
Q ss_pred CCHHHHHHHHHHHHCCC
Q ss_conf 99899999999985020
Q gi|254780673|r 447 PNVDEIIESVESICYKR 463 (467)
Q Consensus 447 p~~~~I~~av~~v~~~~ 463 (467)
T Consensus 340 lt~~~i~~ai~~~l~~~ 356 (640)
T COG4231 340 LTPEKIANAIAKFLGKE 356 (640)
T ss_pred CCHHHHHHHHHHHHCCC
T ss_conf 38999999999984766