HHsearch alignment for GI: 254780673 and conserved domain: PRK11556
>PRK11556 multidrug efflux system subunit MdtA; Provisional.
Probab=97.62 E-value=0.00019 Score=50.82 Aligned_cols=42 Identities=24% Similarity=0.216 Sum_probs=33.7
Q ss_pred EEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECC
Q ss_conf 99953753334317778689899823788513269758999437
Q gi|254780673|r 37 YEVETDKAVMEVESIDEGILGKILCPNGTKNVKVNTPIAAILQE 80 (467)
Q Consensus 37 ~eiETDKat~EV~A~~~G~i~~ilv~eG~e~V~VG~~ia~i~~e 80 (467)
T Consensus 80 Gtv~a~-~~v~v~~~VsG~I~~i~v~~Gd-~VkkGqvLa~iD~~ 121 (415)
T PRK11556 80 GTVTAA-NTVTVRSRVDGQLMALHFQEGQ-QVKAGDLLAEIDPS 121 (415)
T ss_pred EEEEEE-EEEEEEEEEEEEEEEEECCCCC-EECCCCEEEEECCH
T ss_conf 999864-6999987850299999858989-97899999998835