HHsearch alignment for GI: 254780673 and conserved domain: TIGR00759
>TIGR00759 aceE 2-oxo-acid dehydrogenase E1 component, homodimeric type; InterPro: IPR004660 Most members of this family are pyruvate dehydrogenase complex, E1 component. It includes a counterexample from Pseudomonas putida, MdeB, that is active as an E1 component of an alpha-ketoglutarate dehydrogenase complex rather than a pyruvate dehydrogenase complex. The second pyruvate dehydrogenase complex E1 protein from Alcaligenes eutrophus, PdhE, complements an aceE mutant of Escherichia coli but is not part of a pyruvate dehydrogenase complex operon, is more similar to the Pseudomonas putida MdeB than to E. coli AceE, and may have also have a different primary specificity. ; GO: 0016491 oxidoreductase activity.
Probab=97.10 E-value=0.011 Score=38.38 Aligned_cols=219 Identities=17% Similarity=0.240 Sum_probs=133.2
Q ss_pred CCCEECCCCCHHHHH----HHHHHHHHCC--CCCHHH-HHHH------HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 111011666627899----8999988718--864456-6666------78999999999878867421177678887998
Q gi|254780673|r 186 CERVIDTPITEHGFA----GIGIGASFAG--LKPIVE-FMTF------NFAMQAIDQIINSAAKTRYMSGGQITTSIVFR 252 (467)
Q Consensus 186 ~~R~~d~pi~E~~~~----G~a~G~A~~G--~~Piv~-~~~~------~f~~~a~dqi~n~~ak~~~~~gg~~~~p~v~r 252 (467)
T Consensus 569 ~GQ~L~EGInEaGA~~SWiAAaTSYa~hg~PMIPfYIyYSMFGfQRiGDl~WAAADQ~A----R-GFllGaTAG-----R 638 (905)
T TIGR00759 569 DGQILQEGINEAGAMASWIAAATSYATHGEPMIPFYIYYSMFGFQRIGDLCWAAADQRA----R-GFLLGATAG-----R 638 (905)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH----C-CCEECCCCC-----C
T ss_conf 68541310556767777999864565548765415773027640157789998886532----0-000023424-----3
Q ss_pred EECCCCCCCCHHHHHHHHHHHH--HHCCCEEEEEECCHHCCCHHHHHHH---CCCC--EEEECCCCCCCCCCCCCCCCCE
Q ss_conf 3024457644443321688763--2203138665221000105556541---3783--4764021233333453346631
Q gi|254780673|r 253 GPNGAAARVAAQHSQCYAAWYS--HVPGLKVVIPYTASDAKGLLKAAIR---DPNP--VIFLENEILYGSSFEVPMVDDL 325 (467)
Q Consensus 253 ~p~G~~~~~g~~Hs~~~~~~~~--~iPgl~V~~P~~~~d~~~ll~~ai~---~~~P--vi~le~~~ly~~~~~~p~~~~~ 325 (467)
T Consensus 639 T---TL~GEGLQH-~DGhSl~~~~~~Pnc~~YDPaFAyEvAVI~~~Gl~RMy~E~qed~FyY--~Tv~NE~y~~P~mP~~ 712 (905)
T TIGR00759 639 T---TLNGEGLQH-EDGHSLVQAATIPNCIAYDPAFAYEVAVIMEDGLRRMYGEKQEDVFYY--VTVLNENYVQPPMPEG 712 (905)
T ss_pred C---CCCCCCCCC-CCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE--EEEECCCCCCCCCCCC
T ss_conf 0---003566410-003678897353743101751023367878778973236674422476--6450578887888724
Q ss_pred -E------------CCCCCEEEEECCC-CCEEEEHHHHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCCHHHHHHHHHHC
Q ss_conf -2------------1443114443168-745860257888888887531004-675279733006857999999999871
Q gi|254780673|r 326 -V------------IPIGRARIHRQGS-DVTIISFGIGMTYATKAAIELEKN-GIDAELIDLRTIRPMDWQTIFESVKKT 390 (467)
Q Consensus 326 -~------------~p~Gk~~i~~~G~-ditii~~G~~~~~a~~aa~~L~~~-gi~~~vid~r~l~Pld~~~i~~sv~kt 390 (467)
T Consensus 713 lsh~~~~~gi~kG~Yrf~~~~-~~~~~~~vQLLgSG~i~r~v~~Aa~lLa~DyGV~sDvwSvtSf~ELaRdg--~dv~R~ 789 (905)
T TIGR00759 713 LSHEEAEEGILKGLYRFETAT-EEKAKGRVQLLGSGAIMREVIEAAELLAADYGVASDVWSVTSFTELARDG--HDVERW 789 (905)
T ss_pred CCHHHHHHHHHHHHHHHCCCH-HCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH--HHHHHH
T ss_conf 353442677774034410000-10478713675245689999999999875178314552058756765678--999886
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCC
Q ss_conf 9899995788767678999999999677642898299717778
Q gi|254780673|r 391 GRLVTVEEGYPQSSVGSTIANQVQRKVFDYLDAPILTITGRDV 433 (467)
Q Consensus 391 ~~~i~vee~~~~gg~g~~i~~~i~e~~f~~L~~p~~ri~~~d~ 433 (467)
T Consensus 790 nlLHP~e~~-~----vsyVA~~L~~~-----~aPGv~iA~tDY 822 (905)
T TIGR00759 790 NLLHPTETP-R----VSYVAQVLNEA-----DAPGVVIASTDY 822 (905)
T ss_pred HCCCCCCCC-C----CCHHHHHHHCC-----CCCCEEEEECCH
T ss_conf 425878888-7----64898974127-----998069985221