HHsearch alignment for GI: 254780673 and conserved domain: TIGR01347
>TIGR01347 sucB 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; InterPro: IPR006255 These sequences describe the TCA cycle 2-oxoglutarate system E2 component, dihydrolipoamide succinyltransferase. It is closely related to the pyruvate dehydrogenase E2 component, dihydrolipoamide acetyltransferase. Members include the mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus and are generally excluded from this group of sequences as are all examples of dihydrolipoamide acetyltransferase. ; GO: 0004149 dihydrolipoyllysine-residue succinyltransferase activity, 0006099 tricarboxylic acid cycle, 0045252 oxoglutarate dehydrogenase complex.
Probab=99.93 E-value=5.9e-27 Score=208.65 Aligned_cols=76 Identities=38% Similarity=0.680 Sum_probs=73.4
Q ss_pred EEEECCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEC
Q ss_conf 35667888888115789877417897625898599995375333431777868989982378851326975899943
Q gi|254780673|r 3 ILVTMPSLSPTMTEGNIAKWKKNEGDLIKQGDIIYEVETDKAVMEVESIDEGILGKILCPNGTKNVKVNTPIAAILQ 79 (467)
Q Consensus 3 ~ei~mP~lgesm~eG~i~~W~vk~GD~V~~gd~l~eiETDKat~EV~A~~~G~i~~ilv~eG~e~V~VG~~ia~i~~ 79 (467)
T Consensus 1 ~~ikvP~LaESvtegTva~W~KkvGD~V~~DE~iveiETDKV~lEV~Sp~dGvl~~~~~~eG-~TV~~g~~La~~~E 76 (435)
T TIGR01347 1 IEIKVPELAESVTEGTVAEWHKKVGDTVKRDELIVEIETDKVVLEVPSPADGVLQEILEKEG-DTVTSGQVLAVLEE 76 (435)
T ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCEEEEEECCCEEEEEECCCCCHHHHHHCCCC-CEECCCEEEEEEEC
T ss_conf 96447887653553305541068887112277689752074467882885302174306898-88505507788823