HHsearch alignment for GI: 254780673 and conserved domain: TIGR01348
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; InterPro: IPR006256 This group of sequences are a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and percent identity (UPGMA) trees. Members contain two or three copies of the lipoyl-binding domain. Escherichia coli AceF is included in this set while mitochondrial and some other bacterial forms are excluded. dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex; GO: 0004742 dihydrolipoyllysine-residue acetyltransferase activity, 0006096 glycolysis, 0045254 pyruvate dehydrogenase complex.
Probab=99.88 E-value=3.3e-22 Score=175.40 Aligned_cols=201 Identities=19% Similarity=0.301 Sum_probs=128.1
Q ss_pred EEEECCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCC
Q ss_conf 35667888888115789877417897625898599995375333431777868989982378851326975899943777
Q gi|254780673|r 3 ILVTMPSLSPTMTEGNIAKWKKNEGDLIKQGDIIYEVETDKAVMEVESIDEGILGKILCPNGTKNVKVNTPIAAILQEGE 82 (467)
Q Consensus 3 ~ei~mP~lgesm~eG~i~~W~vk~GD~V~~gd~l~eiETDKat~EV~A~~~G~i~~ilv~eG~e~V~VG~~ia~i~~ege 82 (467)
T Consensus 207 ~~v~vPDiGdn~~~~~V~evlV~vGDtV~~~QslItLE~DKA~~EvPa~asGvv~~v~v~vGD-~v~~G~~il~L~~~~s 285 (655)
T TIGR01348 207 QEVKVPDIGDNIEKVEVIEVLVKVGDTVSADQSLITLESDKASMEVPAPASGVVKSVKVKVGD-SVSTGDLILVLSVAGS 285 (655)
T ss_pred EEEECCCCCCCCCCEEEEEEEECCCCEECCCCCEEEEECCEEEEEECCCCCCEEEEEEEEECC-EECCCCEEEEEEECCC
T ss_conf 154426537777750279999543777647886788706714787468985237899986566-7057888999710567
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 721122223321234422233223332223322100000-0112333310000000000000012235544311365069
Q gi|254780673|r 83 TALDIDKMLLEKPDVAISPSSKNTTLVFSNEDNDKVDHQ-KSKNDIQDSSFAHAPTSSITVREALRDAIAEEMRRDKDVF 161 (467)
Q Consensus 83 ~a~~~~~~~a~~~~aa~aaa~~~~s~~~~~a~~~a~~~~-~a~~~~~~~~~~~~~~~~~TvRea~~~a~~e~m~~d~~~~ 161 (467)
T Consensus 286 tp~t~~~p~~a~p~~-~spa~~~~~aAa~pA~~~A~~~~p~~~~t~~~~~~~GrPvv--~A~P~vR~-LARe-------- 353 (655)
T TIGR01348 286 TPATAEAPASAEPAA-QSPAAEQKEAAAAPAAAKAEAPAPVDAGTQNPAKVDGRPVV--HAAPAVRR-LARE-------- 353 (655)
T ss_pred CCCCHHCCCCCCCCC-CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE--ECCHHHHH-HHHH--------
T ss_conf 766413563458745-35034166767777658888778767665687623872300--17628899-9888--------
Q ss_pred EEECCCCCCCC---CCCCCCCHHHHCCCCCEECCCCCHH----HHHHHHHHHHHCCCCCHH--HHHHH
Q ss_conf 99324344588---6653236475408111011666627----899899998871886445--66666
Q gi|254780673|r 162 IMGEEVAEYQG---AYKVTQGLLQEFGCERVIDTPITEH----GFAGIGIGASFAGLKPIV--EFMTF 220 (467)
Q Consensus 162 ~~gedv~~~~g---~f~~t~gl~~~fg~~R~~d~pi~E~----~~~G~a~G~A~~G~~Piv--~~~~~ 220 (467)
T Consensus 354 -~Gvdl~~vkGtg~~GRI~~EDVq~~-v~~~~GtGiPe~rA~aa~a~a~gG--~~~~~P~P~VdFsKF 417 (655)
T TIGR01348 354 -FGVDLSKVKGTGKKGRILREDVQKF-VKEAVGTGIPEKRAKAAAASAAGG--IPGLLPWPEVDFSKF 417 (655)
T ss_pred -HCCEEEEEECCCCCCCCCHHHHHHH-HCCCCCCCCCCCCCCCCCCHHCCC--CCCCCCCCCCCCCCC
T ss_conf -2701111013688886253579998-064336787532255331102031--004687785474325