HHsearch alignment for GI: 254780673 and conserved domain: TIGR01348
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; InterPro: IPR006256 This group of sequences are a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and percent identity (UPGMA) trees. Members contain two or three copies of the lipoyl-binding domain. Escherichia coli AceF is included in this set while mitochondrial and some other bacterial forms are excluded. dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex; GO: 0004742 dihydrolipoyllysine-residue acetyltransferase activity, 0006096 glycolysis, 0045254 pyruvate dehydrogenase complex.
Probab=99.83 E-value=2.6e-20 Score=162.01 Aligned_cols=81 Identities=27% Similarity=0.408 Sum_probs=75.8
Q ss_pred EEEECCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCC
Q ss_conf 35667888888115789877417897625898599995375333431777868989982378851326975899943777
Q gi|254780673|r 3 ILVTMPSLSPTMTEGNIAKWKKNEGDLIKQGDIIYEVETDKAVMEVESIDEGILGKILCPNGTKNVKVNTPIAAILQEGE 82 (467)
Q Consensus 3 ~ei~mP~lgesm~eG~i~~W~vk~GD~V~~gd~l~eiETDKat~EV~A~~~G~i~~ilv~eG~e~V~VG~~ia~i~~ege 82 (467)
T Consensus 1 ~e~~vPDiG~n~~~g~v~evLV~~GD~V~~~Qslit~E~DKA~mEvPss~AG~ik~ikvkVG-Dt~~~G~~i~~l~~~~g 79 (655)
T TIGR01348 1 KEIKVPDIGDNIEEGEVIEVLVKVGDKVEAGQSLITLESDKASMEVPSSKAGIIKEIKVKVG-DTLKEGDVIALLEVSAG 79 (655)
T ss_pred CEECCCCCCCCCCCEEEEEEEECCCCEECCCCCEEEECCCEEEEEECCCCCCEEEEEEEEEC-CCCCCCCEEEEECCCCC
T ss_conf 90005751466775138999868897432687468870671278406899973788975446-65477878999716653
Q ss_pred CC
Q ss_conf 72
Q gi|254780673|r 83 TA 84 (467)
Q Consensus 83 ~a 84 (467)
T Consensus 80 ~a 81 (655)
T TIGR01348 80 SA 81 (655)
T ss_pred CC
T ss_conf 21