HHsearch alignment for GI: 254780673 and conserved domain: cd06848
>cd06848 GCS_H Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (GCS) found in bacteria, archea and the mitochondria of eukaryotes. GCS is a multienzyme complex consisting of 4 different components (P-, H-, T- and L-proteins) which catalyzes the oxidative cleavage of glycine. The H-protein shuttles the methylamine group of glycine from the P-protein (glycine dehydrogenase) to the T-protein (aminomethyltransferase) via a lipoyl group, attached to a completely conserved lysine residue.
Probab=97.09 E-value=0.00095 Score=45.84 Aligned_cols=47 Identities=26% Similarity=0.184 Sum_probs=39.2
Q ss_pred EEEEE-EECCCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECC
Q ss_conf 78987-741789762589859999537533343177786898998237
Q gi|254780673|r 17 GNIAK-WKKNEGDLIKQGDIIYEVETDKAVMEVESIDEGILGKILCPN 63 (467)
Q Consensus 17 G~i~~-W~vk~GD~V~~gd~l~eiETDKat~EV~A~~~G~i~~ilv~e 63 (467)
T Consensus 29 G~i~~v~lp~~g~~v~~g~~~~~iEs~k~~~~i~sPv~G~vv~~N~~l 76 (96)
T cd06848 29 GDIVFVELPEVGTEVKKGDPFGSVESVKAASDLYSPVSGEVVEVNEAL 76 (96)
T ss_pred CCEEEEECCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEHHHH
T ss_conf 998999917999701389859999963357887377166999837965