PSIBLAST alignment of GI: 254780673 and protein with PDB id: 1w85
>gi|56966701|pdb|1W85|B Chain B, The Crystal Structure Of Pyruvate Dehydrogenase E1 Bound To The Peripheral Subunit Binding Domain Of E2 Length = 324
>gi|56966703|pdb|1W85|D Chain D, The Crystal Structure Of Pyruvate Dehydrogenase E1 Bound To The Peripheral Subunit Binding Domain Of E2 Length = 324
Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats.
Identities = 128/323 (39%), Positives = 190/323 (58%), Gaps = 1/323 (0%)
Query: 139 SITVREALRDAIAEEMRRDKDVFIMGEEVAEYQGAYKVTQGLLQEFGCERVIDTPITEHG 198
+T+ +A+ DA+ E++ D +V I GE+V G ++ T+GL EFG +RV DTP+ E G
Sbjct: 2 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESG 61
Query: 199 FAGIGIGASFAGLKPIVEFMTFNFAMQAIDQIINSAAKTRYMSGGQITTSIVFRGPNGAA 258
G+ IG + G +P+ E F F + +D I A+ RY +GG+ I R P G
Sbjct: 62 IGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGG 121
Query: 259 ARVAAQHSQCYAAWYSHVPGLKVVIPYTASDAKGLLKAAIRDPNPVIFLENEILYGSSFE 318
HS + PGLKVVIP T DAKGLL +AIRD +PVIFLE+ LY S +
Sbjct: 122 VHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQ 181
Query: 319 VPMVDDLVIPIGRARIHRQGSDVTIISFGIGMTYATKAAIELEKNGIDAELIDLRTIRPM 378
+ IPIG+A I R+G D+TII++G + + KAA ELEK GI AE++DLRT++P+
Sbjct: 182 EVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPL 241
Query: 379 DWQTIFESVKKTGRLVTVEEGYPQSSVGSTIANQVQRKVFDYLDAPILTITGRDVPMPYA 438
D +TI SV+KTGR + V+E Q+ + + + ++ + L+AP+L + D P+A
Sbjct: 242 DIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFA 301
Query: 439 ANLEKLALPNVDEIIESVESICY 461
E + LPN ++IE+ + +
Sbjct: 302 QA-ESVWLPNFKDVIETAKKVMN 323