HHsearch alignment for GI: 254780674 and conserved domain: PRK05352

>PRK05352 Na(+)-translocating NADH-quinone reductase subunit A; Provisional.

Probab=96.65  E-value=0.0026  Score=41.85  Aligned_cols=43  Identities=23%  Similarity=0.299  Sum_probs=34.0

Q ss_pred             EEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEE
Q ss_conf             99999816897852798599995265312453687868999992
Q gi|254780674|r   19 KLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILV   62 (423)
Q Consensus        19 tI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v   62 (423)
T Consensus        40 l~pkl~VkeGD~V~~Gq~Lf~dK~~-~~v~~~SPvSG~V~~I~r   82 (448)
T PRK05352         40 LKPTMKVKEGDKVKKGQPLFEDKKN-PGVKFTAPASGTVSAINR   82 (448)
T ss_pred             CCCCEEECCCCEECCCCEEEECCCC-CCEEEECCCCEEEEEEEC
T ss_conf             9985685579997479855653898-962696889829952205