HHsearch alignment for GI: 254780674 and conserved domain: TIGR01348
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; InterPro: IPR006256 This group of sequences are a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and percent identity (UPGMA) trees. Members contain two or three copies of the lipoyl-binding domain. Escherichia coli AceF is included in this set while mitochondrial and some other bacterial forms are excluded. dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex; GO: 0004742 dihydrolipoyllysine-residue acetyltransferase activity, 0006096 glycolysis, 0045254 pyruvate dehydrogenase complex.
Probab=100.00 E-value=0 Score=851.03 Aligned_cols=420 Identities=25% Similarity=0.434 Sum_probs=358.2
Q ss_pred CEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCC
Q ss_conf 34786788788721799999981689785279859999526531245368786899999248860403585599997075
Q gi|254780674|r 3 IHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDS 82 (423)
Q Consensus 3 ~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~ 82 (423)
T Consensus 206 ~~~v~vPDiGdn~~~~~V~evlV~vGDtV~~~QslItLE~DKA~~EvPa~asGvv~~v~v~vG-D~v~~G~~il~L~~~~ 284 (655)
T TIGR01348 206 VQEVKVPDIGDNIEKVEVIEVLVKVGDTVSADQSLITLESDKASMEVPAPASGVVKSVKVKVG-DSVSTGDLILVLSVAG 284 (655)
T ss_pred CEEEECCCCCCCCCCEEEEEEEECCCCEECCCCCEEEEECCEEEEEECCCCCCEEEEEEEEEC-CEECCCCEEEEEEECC
T ss_conf 415442653777775027999954377764788678870671478746898523789998656-6705788899971056
Q ss_pred CCCCCCCCCCCCCCC-C--CCCCC--------CCCCCCCCC--CCCCCCC------CCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 421111122210001-1--11122--------222333222--2222222------223432210111100000110123
Q gi|254780674|r 83 TEIPPSPPLSKENIV-E--VREEH--------SHSSPVVVR--EKHSKNR------PIASPLARRLAGEHGIDLSSLSGS 143 (423)
Q Consensus 83 ~~~~~~~~~~~~~~~-~--~~~~~--------~~~~~~~~~--~~~~~~~------~~aSP~aRklA~e~giDl~~V~GT 143 (423)
T Consensus 285 stp~t~~~p~~a~p~~~spa~~~~~aAa~pA~~~A~~~~p~~~~t~~~~~~~GrPvv~A~P~vR~LARe~Gvdl~~vkGt 364 (655)
T TIGR01348 285 STPATAEAPASAEPAAQSPAAEQKEAAAAPAAAKAEAPAPVDAGTQNPAKVDGRPVVHAAPAVRRLAREFGVDLSKVKGT 364 (655)
T ss_pred CCCCCHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCEEEEEECC
T ss_conf 77664135634587453503416676777765888877876766568762387230017628899988827011110136
Q ss_pred CCCCCCCCCHHHHHHHHCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCH
Q ss_conf 4433222100244432000------1000111221112444445554654345662465511122110111000123210
Q gi|254780674|r 144 GPHGRIVKSDIETLISTKT------NVKDYSTIQSFGLVDESIDANILNLFAKDSYEVIPHDNIRKTIACRLQQSKQTIP 217 (423)
Q Consensus 144 G~~GRItk~DV~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~s~irk~ia~~m~~S~~~iP 217 (423)
T Consensus 365 g~~GRI~~EDVq~~v~~~~GtGiPe~rA~aa~a~a~gG~~~~~P~P~VdFsKFGeve~~~lsri~k~~~anL~r~W~~iP 444 (655)
T TIGR01348 365 GKKGRILREDVQKFVKEAVGTGIPEKRAKAAAASAAGGIPGLLPWPEVDFSKFGEVEEVDLSRIRKISGANLTRNWVMIP 444 (655)
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCHHHCCCCCC
T ss_conf 88886253579998064336787532255331102031004687785474325447751366401100011212553478
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHH-HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC--CCCCEECCCCCCCEEEE
Q ss_conf 00001222332046787775665-5543201466554322210111001100000000112--34410125566541565
Q gi|254780674|r 218 HFYVSIDCNIDNLLSLREQMNRT-LQFHREEISNKISVNDIILKAFALAMIQVPEANVSWT--TNAMIRHKHIDISVAVS 294 (423)
Q Consensus 218 h~~~~~evd~t~l~~~R~~l~~~-~~~~~~~~~~kit~~~~l~kA~a~AL~~~P~~Na~~~--~~~i~~~~~vnIgiAv~ 294 (423)
T Consensus 445 hVT~FDkaDiT~lEa~R~~~~~EnAa~~KnG~G~KLT~~~~L~Ka~A~aL~~~P~FNaSL~~~g~~l~~KkYv~IG~AvD 524 (655)
T TIGR01348 445 HVTHFDKADITELEAFRKQQNKENAAVEKNGEGVKLTVLAILMKAVAAALKKFPKFNASLDLGGEQLILKKYVNIGVAVD 524 (655)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEE
T ss_conf 21026811168999999871510001311789810358899999999999753531466230326355534688667855
Q ss_pred ECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf 14642020341455479899999876665431023346100377238985153214221013115887168984463123
Q gi|254780674|r 295 IPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGMLGINSFCAVINPPQSTILAIGAGEKK 374 (423)
Q Consensus 295 ~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG~~g~~~~~pii~~pq~aILgvG~~~~~ 374 (423)
T Consensus 525 TP~GLlVPV~kdvdrKGi~eL~~e~~~LA~kAR~~KL~p~~MqGacFtISsLGGiGGt~FtPIvNaPEVAILGVSks~~~ 604 (655)
T TIGR01348 525 TPNGLLVPVIKDVDRKGIVELALELSDLAKKARDGKLTPDEMQGACFTISSLGGIGGTAFTPIVNAPEVAILGVSKSAME 604 (655)
T ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHCCHHHCC
T ss_conf 79984753286468413899999999999986126868302378405110223455454667305741342320144153
Q ss_pred EEEECC--EEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf 587789--3789548898985200114028899999999998719889719
Q gi|254780674|r 375 VVFQNE--EIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVWMLM 423 (423)
Q Consensus 375 ~~~~~~--~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~ll~ 423 (423)
T Consensus 605 PvW~g~kG~F~Pr~mLPLSLsYDHRvIdGA~AArF~~~l~~~L~D~r~~~L 655 (655)
T TIGR01348 605 PVWDGKKGEFEPRLMLPLSLSYDHRVIDGADAARFTTYLSELLADIRRLLL 655 (655)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 431687675576000530000010022354688999998755544886709