HHsearch alignment for GI: 254780674 and conserved domain: TIGR01349
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; InterPro: IPR006257 This group of sequences represent one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria, but not the Gram-positive bacteria.; GO: 0004742 dihydrolipoyllysine-residue acetyltransferase activity, 0006090 pyruvate metabolic process, 0045254 pyruvate dehydrogenase complex.
Probab=100.00 E-value=0 Score=901.12 Aligned_cols=419 Identities=51% Similarity=0.818 Sum_probs=355.3
Q ss_pred EEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCC
Q ss_conf 78678878872179999998168978527985999952653124536878689999924886040358559999707542
Q gi|254780674|r 5 TITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDSTE 84 (423)
Q Consensus 5 ~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~ 84 (423)
T Consensus 1 ~i~MPaLSPTM~~Gnla~W~KKeGDkv~~GDViaEIETDKAtm~~e~~~eGyLAKILv~eGTkdvpvn~pIAV~v~~~eD 80 (584)
T TIGR01349 1 KITMPALSPTMTEGNLAKWLKKEGDKVKPGDVIAEIETDKATMEFEAQEEGYLAKILVPEGTKDVPVNKPIAVLVEEKED 80 (584)
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCEECCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCH
T ss_conf 98888887154656210244113777168876988745842674576268578888652478576358616896068011
Q ss_pred CCCC-C---------------CCCCCCCCCC------------CCC----------------------------------
Q ss_conf 1111-1---------------2221000111------------112----------------------------------
Q gi|254780674|r 85 IPPS-P---------------PLSKENIVEV------------REE---------------------------------- 102 (423)
Q Consensus 85 ~~~~-~---------------~~~~~~~~~~------------~~~---------------------------------- 102 (423)
T Consensus 81 ~~~a~~~~~~~~~a~~TP~~~pAp~P~~~a~PPtPsa~~~~~~YP~H~~V~lPALSP~M~~G~~~~W~KK~G~~~~~GD~ 160 (584)
T TIGR01349 81 VADAFKDYKLEDSASSTPVAEPAPKPKEKAPPPTPSAKKSTKSYPAHKVVLLPALSPSMETGTVARWEKKVGDKLKEGDL 160 (584)
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCE
T ss_conf 88998088700104788877787787223765586445778888864323245657655667400001345762233752
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|254780674|r 103 -------------------------------------------------------------------------------- 102 (423)
Q Consensus 103 -------------------------------------------------------------------------------- 102 (423)
T Consensus 161 ~AE~ETDKAT~~F~~~~~GYLAKILVP~GT~~~~~~~P~CIIV~~~~D~~~FADY~~~E~~~~~~q~~~~~~~~~s~~~~ 240 (584)
T TIGR01349 161 LAEVETDKATIDFEVEDEGYLAKILVPEGTRDVQLNTPLCIIVKKKEDIDKFADYRVEEVSDLKSQTAPPSAPHYSKKSP 240 (584)
T ss_pred EEEEECCCEEECCEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 55542252022214635761899872888756637886489972600123442776311024667788777787677756
Q ss_pred ------CCCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHC-------CCCCCCC
Q ss_conf ------2222333222222222-2223432210111100000110123443322210024443200-------0100011
Q gi|254780674|r 103 ------HSHSSPVVVREKHSKN-RPIASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLISTK-------TNVKDYS 168 (423)
Q Consensus 103 ------~~~~~~~~~~~~~~~~-~~~aSP~aRklA~e~giDl~~V~GTG~~GRItk~DV~~~~~~~-------~~~~~~~ 168 (423)
T Consensus 241 a~~~~~~~~~~~~~~~~~~~~~GriFAsPLAk~LA~ekgidL~~v~GsGP~GRI~K~Die~~~p~~aakPaG~~~~a~~~ 320 (584)
T TIGR01349 241 APAEQAPEPSSPAPLSDKESKDGRIFASPLAKKLAKEKGIDLSAVAGSGPNGRIVKKDIESFVPKSAAKPAGKPASANEA 320 (584)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCH
T ss_conf 77654678887766655668888178276898888753972212224086784774311026875431666541333111
Q ss_pred CCCCCCCCCC---CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 1221112444---4455546543456624655111221101110001232100000122233204678777566555432
Q gi|254780674|r 169 TIQSFGLVDE---SIDANILNLFAKDSYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHR 245 (423)
Q Consensus 169 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~ 245 (423)
T Consensus 321 ~~~a~tp~~~tssttA~~~~~~~~tg~Y~d~P~sniRk~IA~RL~eSKq~iPHyYvs~~~~~~~LL~LR~~LNa~~~~~~ 400 (584)
T TIGR01349 321 AAAAKTPAAKTSSTTAAKAAAPVSTGSYEDVPLSNIRKIIAKRLLESKQTIPHYYVSVECNVDKLLKLRKELNAMAEEDD 400 (584)
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHHCCCCC
T ss_conf 20366775323322235677888886446678883268999999887568860799998861068999999984467888
Q ss_pred HCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC--CCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 014665543222101110011000000001123--441012556654156514642020341455479899999876665
Q gi|254780674|r 246 EEISNKISVNDIILKAFALAMIQVPEANVSWTT--NAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLA 323 (423)
Q Consensus 246 ~~~~~kit~~~~l~kA~a~AL~~~P~~Na~~~~--~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~ 323 (423)
T Consensus 401 GkP~~KlSVND~iikA~a~Al~~vP~aN~~W~~~~~~Ir~y~~vDiSVAVatP~GliTPIVr~a~~Kgl~~IS~e~K~L~ 480 (584)
T TIGR01349 401 GKPRYKLSVNDFIIKASALALREVPEANSSWTDVDDVIRRYKNVDISVAVATPDGLITPIVRNADAKGLSEISNEVKDLA 480 (584)
T ss_pred CCCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECEEEEEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHH
T ss_conf 88505666000799999999872990253534777606861201488776568882545072157246789999999999
Q ss_pred HHHCCCCCCCCCCCCCEEEEECCCCC-CCCCCCCCCCCCCEEEEEECCCEEEEEEECCE---EEEEEEEEEEEEEEECEE
Q ss_conf 43102334610037723898515321-42210131158871689844631235877893---789548898985200114
Q gi|254780674|r 324 QRAKQRKLKPEEYQGGTTSISNMGML-GINSFCAVINPPQSTILAIGAGEKKVVFQNEE---IKVATIMNATLSADHRSV 399 (423)
Q Consensus 324 ~~ar~~~l~~~d~~ggtftiSNlG~~-g~~~~~pii~~pq~aILgvG~~~~~~~~~~~~---i~~~~~~~ltls~DHRvi 399 (423)
T Consensus 481 ~rAr~~KL~P~EfqGGTftISNLGM~nGik~F~AIiNPPQA~ILAvG~~~~~~vv~n~~e~G~~~a~~m~vTLS~DHRVi 560 (584)
T TIGR01349 481 KRARENKLKPEEFQGGTFTISNLGMFNGIKDFTAIINPPQACILAVGASEDRAVVDNKEEKGFEVASIMSVTLSCDHRVI 560 (584)
T ss_pred HHHHHCCCCCEEECCCCEEEECCCCCCHHHCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCEEECCEEEEEECCCCCEE
T ss_conf 99864378832454887567123114311143021173256440221323332003778898135675668304266333
Q ss_pred EHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf 028899999999998719889719
Q gi|254780674|r 400 DGAIASKLLAKFKEYIENPVWMLM 423 (423)
Q Consensus 400 dGa~aa~Fl~~~~~~le~P~~ll~ 423 (423)
T Consensus 561 DGA~gA~fl~~fk~~~EnP~~mLL 584 (584)
T TIGR01349 561 DGAVGAEFLKEFKKYLENPLEMLL 584 (584)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 324789999998788632687709