HHsearch alignment for GI: 254780674 and conserved domain: TIGR03077
>TIGR03077 not_gcvH glycine cleavage protein H homolog, Chlamydial. The H protein (GcvH) of the glycine cleavage system shuttles the methylamine group of glycine from the P protein to the T protein. Most Chlamydia but lack the P and T proteins, and have a single homolog of GcvH that appears deeply split from canonical GcvH in molecular phylogenetic trees. The protein family modeled here is observed the Chlamydial GcvH homolog, so far always seen as part of a two-gene operon, downstream of a member of the uncharacterized protein family TIGR03076. The function of this protein is unknown.
Probab=97.42 E-value=0.00018 Score=49.69 Aligned_cols=44 Identities=20% Similarity=0.296 Sum_probs=38.0
Q ss_pred EEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEEC
Q ss_conf 999998168978527985999952653124536878689999924
Q gi|254780674|r 19 KLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVP 63 (423)
Q Consensus 19 tI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~ 63 (423)
T Consensus 33 ~~v~-lp~~G~~v~~g~~~~~vEs~K~~~~i~sPvsG~VvevN~~ 76 (110)
T TIGR03077 33 LHID-LPSVGSSCKEGEVLVILESSKSAIEVLSPVSGEVIEVNIA 76 (110)
T ss_pred EEEE-CCCCCCEEECCCEEEEEEECEEEECCCCCCCEEEEEEHHH
T ss_conf 9997-7899998857985999996516120207876699986684