HHsearch alignment for GI: 254780674 and conserved domain: pfam00302
>pfam00302 CAT Chloramphenicol acetyltransferase.
Probab=99.19 E-value=7.6e-10 Score=85.57 Aligned_cols=175 Identities=12% Similarity=0.172 Sum_probs=124.6
Q ss_pred CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC-CCCCEECCCCCCCEEE
Q ss_conf 210000012223320467877756655543201466554322210111001100000000112-3441012556654156
Q gi|254780674|r 215 TIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQVPEANVSWT-TNAMIRHKHIDISVAV 293 (423)
Q Consensus 215 ~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~P~~Na~~~-~~~i~~~~~vnIgiAv 293 (423)
T Consensus 24 ~~p~~siT~~vDvT~l~~~~K~-------------~~~sF~~~~ly~v~kavN~~~efr~ri~~dg~vv~~d~i~ps~Ti 90 (206)
T pfam00302 24 VPCTYSMTVKLDITALLKALKE-------------KGYKFYPALIYLIARVVNRHPEFRMALNDDGELGYWDSVNPSYTV 90 (206)
T ss_pred CCCEEEEEEEEEHHHHHHHHHH-------------CCCCHHHHHHHHHHHHHHCCHHHHEEEECCCEEEEEEEECEEEEE
T ss_conf 9977999988889999999998-------------299817999999999985586561688389849998674205578
Q ss_pred EECC-CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCC-CCCCC-CCCCCEEEEECCCCCCCCCCC-CCCCCCC--EEEEE
Q ss_conf 5146-42020341455479899999876665431023-34610-037723898515321422101-3115887--16898
Q gi|254780674|r 294 SIPG-GIVTPIIRQADQKSILDISLEVKQLAQRAKQR-KLKPE-EYQGGTTSISNMGMLGINSFC-AVINPPQ--STILA 367 (423)
Q Consensus 294 ~~~~-GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~-~l~~~-d~~ggtftiSNlG~~g~~~~~-pii~~pq--~aILg 367 (423)
T Consensus 91 ~~~d~~tFs~~~-~~y~~df~~F~~~~~~~~~~~~~~~~~~~~~~~~~n~~~iS~lPW~~Ft~~~~~~~~~~~~~~P~it 169 (206)
T pfam00302 91 FHKETETFSSLW-TEYDPDFTQFYDNYLSDIAEYGDDTKLFPKGNPPENTFNVSSIPWVSFTGFNLNIANGSDYLAPIFT 169 (206)
T ss_pred EECCCCEEEEEE-ECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 847996399999-5267879999999999999863245756689998888997312122555554565679877586699
Q ss_pred ECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHH
Q ss_conf 44631235877893789548898985200114028899999999
Q gi|254780674|r 368 IGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKF 411 (423)
Q Consensus 368 vG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~ 411 (423)
T Consensus 170 ~GKy~~----~~gr----~~mPvsvqvhHa~~DG~Hv~~F~~~l 205 (206)
T pfam00302 170 MGKYYQ----EGNK----ILLPLSIQVHHAVCDGFHAGRFINEL 205 (206)
T ss_pred EEEEEE----ECCE----EEEEEEEEEEECCCCHHHHHHHHHHH
T ss_conf 724798----8999----99989999962001619999999974