HHsearch results for GI: 254780674 and protein with PDBid: 1q23_A
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A*
Probab=100.00 E-value=4.8e-42 Score=299.48 Aligned_cols=208 Identities=13% Similarity=0.114 Sum_probs=182.9
Q ss_pred CCCEEEEECC-CCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 6624655111-221101110001232100000122233204678777566555432014665543222101110011000
Q gi|254780674|r 191 DSYEVIPHDN-IRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQV 269 (423)
Q Consensus 191 ~~~~~vp~s~-irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~ 269 (423)
.+++.+.++. .||...+.... .+.|||+++.++|+|++++++++ .++||+++++||+++||.+|
T Consensus 6 ~~~~~Id~~~w~R~~~f~~f~~--~~~P~~~~t~~iDvt~l~~~~k~-------------~~~sf~~~~~~ai~~Al~~~ 70 (219)
T 1q23_A 6 TGYTTVDISQWHRKEHFEAFQS--VAQCTYNQTVQLDITAFLKTVKK-------------NKHKFYPAFIHILARLMNAH 70 (219)
T ss_dssp CCEEECCGGGCTTHHHHHHHTT--TTCEEEEEEEEEECHHHHHHHHH-------------TTCCHHHHHHHHHHHHHTTC
T ss_pred CCCEEECHHHCCHHHHHHHHHC--CCCCEEEEEEEEEHHHHHHHHHH-------------CCCCCHHHHHHHHHHHHHHC
T ss_conf 7775876332503999999747--89988999999868999999998-------------29982899999999999859
Q ss_pred CCCCCCCCCCCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCC-CCCCCCCCCCEEEEECCCC
Q ss_conf 000001123441012556654156514642020341455479899999876665431023-3461003772389851532
Q gi|254780674|r 270 PEANVSWTTNAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQR-KLKPEEYQGGTTSISNMGM 348 (423)
Q Consensus 270 P~~Na~~~~~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~-~l~~~d~~ggtftiSNlG~ 348 (423)
|++|++|+++++.+++++|+|+||++++||++|+|++++++++.++++++.++..+++++ +|.++++.+|||||||+|.
T Consensus 71 Pe~n~~~~~~~i~~~~~i~~~~av~~~~~~~~~~i~~~~~~~l~~f~~~~~~~~~~~~~~~~l~~~~~~~~t~~iS~lg~ 150 (219)
T 1q23_A 71 PEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPW 150 (219)
T ss_dssp GGGSEEEETTEEEEESCCEEEEEEEETTTTEEEEEECCCCSSHHHHHHHHHHHHHHHTTCCSSSTTCCCSSEEEEEECTT
T ss_pred HHHHEEEECCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
T ss_conf 68648995997899456346888984898698148058889999999999999999972589994103599899984786
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCH
Q ss_conf 1422101311588716898446312358778937895488989852001140288999999999987198
Q gi|254780674|r 349 LGINSFCAVINPPQSTILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENP 418 (423)
Q Consensus 349 ~g~~~~~pii~~pq~aILgvG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P 418 (423)
+|.+.+++++++|+.+++++.... ++++.+| |++|+|||+||||++||+++|+||+.|+++||+.
T Consensus 151 ~~f~~~~~~~~~~~~~~~p~~~~G-k~~~~~g----r~~mplsl~~dHr~vDG~~aa~Fl~~l~~~le~~ 215 (219)
T 1q23_A 151 VSFTSFDLNVANMDNFFAPVFTMG-KYYTQGD----KVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEW 215 (219)
T ss_dssp CCCSEEEEEESCCTTCCSCEEEEC-CCEEETT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCHHEEEEEEECC-CEEEECC----EEEEEEEEEEECHHHCCHHHHHHHHHHHHHHHCC
T ss_conf 674770478889703089998615-5698999----0999999997401427499999999999998540