HHsearch results for GI: 254780674 and protein with PDBid: 2i9d_A
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- 2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.5e-40 Score=289.42 Aligned_cols=193 Identities=13% Similarity=0.102 Sum_probs=171.5
Q ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC-
Q ss_conf 2211011100012321000001222332046787775665554320146655432221011100110000000011234-
Q gi|254780674|r 201 IRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQVPEANVSWTTN- 279 (423)
Q Consensus 201 irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~P~~Na~~~~~- 279 (423)
.||...+.+... ..|||+++.++|+|+|+++|++ .|+||+++++||+++||.+||+||++|+++
T Consensus 14 ~R~~~f~~f~~~--~~P~~s~t~~iDvt~l~~~~k~-------------~k~sf~~~l~~av~~al~~~Pe~n~~~~~d~ 78 (217)
T 2i9d_A 14 ERKENFNFFRHF--QNPQLSITSEVECGGARQRAKA-------------AGQSFFLHYLYAVLRAANEIPEFRYRIDPDG 78 (217)
T ss_dssp TTHHHHHHHTTC--SBCEEEEEEEEECHHHHHHHHH-------------TTCCHHHHHHHHHHHHHHHSGGGGEEECTTS
T ss_pred CHHHHHHHHHCC--CCCEEEEEEEEEHHHHHHHHHH-------------CCCCCHHHHHHHHHHHHHHCHHHEEEECCCC
T ss_conf 459999998578--9987999999888999999998-------------3998279999999999863967649984895
Q ss_pred CCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC-------CCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 4101255665415651464202034145547989999987666543102-------334610037723898515321422
Q gi|254780674|r 280 AMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQ-------RKLKPEEYQGGTTSISNMGMLGIN 352 (423)
Q Consensus 280 ~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~-------~~l~~~d~~ggtftiSNlG~~g~~ 352 (423)
++++|+++|+|+||++++||++|++++++.+++.++.+++.++.+++|+ +++++.++++|||||||+|.+|.+
T Consensus 79 ~i~~~~~v~i~~av~~~~~~~~~~i~~~~~~~l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iSnlg~~~ft 158 (217)
T 2i9d_A 79 RVVLYDTIDMLSPIKIKENGKFFTTRFPYHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPDLYFT 158 (217)
T ss_dssp CEEEESCCEEEEEEECSTTSCEEEEEECCCSSHHHHHHHHHHHHHHCCSSCCTTHHHHHHHHHTCCCEEEEEECTTCCCS
T ss_pred EEEECCCCCEEEEEEECCCCEECEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf 79983765579999827994764182488799999999999999998761102431578874567988999568865655
Q ss_pred CCCCCCCCCCEE---EEEECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHC
Q ss_conf 101311588716---8984463123587789378954889898520011402889999999999871
Q gi|254780674|r 353 SFCAVINPPQST---ILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIE 416 (423)
Q Consensus 353 ~~~pii~~pq~a---ILgvG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le 416 (423)
++++++++|+.. +++.|+... .+| |.+|++||+||||+|||++||+||+.++++||
T Consensus 159 ~~~~~~~~~~~~~~P~i~~Gk~~~----~~g----r~~mpvslt~DHrviDG~~aa~Fl~~l~~~LE 217 (217)
T 2i9d_A 159 SITGTQEKRSGNNYPLLNAGKAII----REG----RLVMPIAMTIHHGFIDGHHLSLFYKKVEDFLK 217 (217)
T ss_dssp EECCCBCSTTCCSSCEEEECCCEE----ETT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCEEEEEECCCEEE----ECC----EEEEEEEEEEECHHHCHHHHHHHHHHHHHHHC
T ss_conf 624666688531788998366688----999----69999978966235481999999999999749