HHsearch results for GI: 254780674 and protein with PDBid: 3l60_A
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=497.12 Aligned_cols=224 Identities=25% Similarity=0.450 Sum_probs=215.8
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 62465511122110111000123210000012223320467877756655543201466554322210111001100000
Q gi|254780674|r 192 SYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQVPE 271 (423)
Q Consensus 192 ~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~P~ 271 (423)
+.+.+|+++|||+||++|++||++|||||++.|+|+|+|+++|+++++ .+.|+|+++|++||+++||++||.
T Consensus 13 ~~~~~pl~~~r~~ia~~m~~S~~~iPh~~~~~evd~t~l~~~r~~~~~--------~~~k~s~~~~~ikA~~~aL~~~P~ 84 (250)
T 3l60_A 13 GPDVRPVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVS--------AAPEITPFALTLRLLVIALKHNVI 84 (250)
T ss_dssp -CCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHTT--------TCTTCCHHHHHHHHHHHHHHHCGG
T ss_pred CCCEEECHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHHH--------HCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 974307659999999999998861997999999876999999898765--------255553115379999999984842
Q ss_pred CCCCCCC----CCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
Q ss_conf 0001123----441012556654156514642020341455479899999876665431023346100377238985153
Q gi|254780674|r 272 ANVSWTT----NAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMG 347 (423)
Q Consensus 272 ~Na~~~~----~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG 347 (423)
+|++|.+ +.+.+++.+||||||++++||+|||||+||+++|.+|++++++|.++||+|+|+++|++||||||||+|
T Consensus 85 ~N~~~~~~~~~~~i~~~~~vnIgvAv~~~~GL~vPvI~~a~~~sl~eia~~~~~l~~~ar~~~L~~~d~~ggtftisnlG 164 (250)
T 3l60_A 85 LNSTWVDSGEGPQVHVHRGVHLGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFG 164 (250)
T ss_dssp GSEEEECTTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCGGGGSCCSEEEECGG
T ss_pred CCCCEEECCCCCEEEEECCEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
T ss_conf 37726523688669997544320444678966983581775489999999889999998728978201488339998788
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf 2142210131158871689844631235877893789548898985200114028899999999998719889719
Q gi|254780674|r 348 MLGINSFCAVINPPQSTILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVWMLM 423 (423)
Q Consensus 348 ~~g~~~~~pii~~pq~aILgvG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~ll~ 423 (423)
+||+.+|+|||||||+||||+|+++++|++.+|++++|++|+||||||||+|||++|++||++|+++||||++|||
T Consensus 165 ~~g~~~~tpii~ppq~aIl~vG~i~~~pv~~~g~i~~r~~m~lslt~DHRviDGa~aa~FL~~lk~~LE~P~~lLl 240 (250)
T 3l60_A 165 ALGVDDGVPVINHPEAAILGLGAIKPRPVVVGGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETALL 240 (250)
T ss_dssp GGTCSSCCCCCCTTCSEEEEECCCEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSHHHHTT
T ss_pred CCCCCEEEECCCCCCCEEEECCCCCEEEEEECCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 8773417841469963387415652477888998899789999888525221629999999999999719999997