HHsearch alignment for GI: 254780675 and conserved domain: COG0493

>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only].

Probab=97.79  E-value=1.8e-05  Score=58.61  Aligned_cols=89  Identities=17%  Similarity=0.263  Sum_probs=67.1

Q ss_pred             CCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCC-------C--CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCC
Q ss_conf             443215654332100023210133310000000012-------2--2222212221001220123322100134420223
Q gi|254780675|r  189 KSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRIL-------P--VEDSEISQFVQRSLQKRGIKILTESKISSVKQKG  259 (481)
Q Consensus       189 ~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~  259 (481)
T Consensus       124 ~~VaviGaGPAGl~~a~~L~~~G~~Vtv~e~~~~~GGll~yGIP~~kl~k~i~d~~i~~l~~~Gv~~~~~~~vG~-----  198 (457)
T COG0493         124 KKVAVIGAGPAGLAAADDLSRAGHDVTVFERVALDGGLLLYGIPDFKLPKDILDRRLELLERSGVEFKLNVRVGR-----  198 (457)
T ss_pred             CEEEEECCCCHHHHCHHHHHHCCCEEEECCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHCCCEEEECCEECC-----
T ss_conf             679998889515558899986898799826667774479814844646420689999999874909998667799-----


Q ss_pred             CCCCEEEEECCCCEEEEECCCEEECCCC-EEE
Q ss_conf             4310124403674021102322430574-220
Q gi|254780675|r  260 DMVSVQVERKDGSVSSMQAEKLLLSAGV-QGN  290 (481)
Q Consensus       260 ~~~~v~~~~~dG~~~~i~~D~vl~a~Gr-~Pn  290 (481)
T Consensus       199 ---~it~~~-----L~~e~Dav~l~~G~~~~~  222 (457)
T COG0493         199 ---DITLEE-----LLKEYDAVFLATGAGKPR  222 (457)
T ss_pred             ---CCCHHH-----HHHHHCEEEEECCCCCCC
T ss_conf             ---678999-----865328799932667887