HHsearch alignment for GI: 254780675 and conserved domain: COG1148
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion].
Probab=99.54 E-value=2.2e-14 Score=123.30 Aligned_cols=196 Identities=21% Similarity=0.339 Sum_probs=110.9
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCC----CCCCCCCC--------------EE--CCCCCCCCCCC---CCCC--CCC
Q ss_conf 389972455257543111011134555----42212452--------------11--13334443215---6543--321
Q gi|254780675|r 147 GTYKAKHIIIATGARPRHIEGIEPDSH----LIWTYFDA--------------LK--PSKTPKSLIVM---GSGA--IGV 201 (481)
Q Consensus 147 ~~~~a~~ivIATGs~p~~~~g~~~~~~----~~~t~~~~--------------l~--l~~~p~~ivIi---GgG~--ig~ 201 (481)
T Consensus 297 ve~~vGaIIvAtGy~~~Da~~k~EyGYG~~~nVIT~lElErml~~~GPT~GkvlrpSdg~~PkrVaFIqCVGSRD~~~~n 376 (622)
T COG1148 297 VELEVGAIIVATGYKPFDATRKEEYGYGKYPNVITNLELERMLNPNGPTGGKVLRPSDGKPPKRVAFIQCVGSRDFQVGN 376 (622)
T ss_pred EEEEECEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCC
T ss_conf 99971529997246555710043338887744444789998735579988617713799987468999961465666688
Q ss_pred CCH----HHH--------H-CC-CCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCC-CCEEE
Q ss_conf 000----232--------1-01-333100000000122222221222100122012332210013442022343-10124
Q gi|254780675|r 202 EFS----SFY--------K-SL-DVDVSLIEVKDRILPVEDSEISQFVQRSLQKRGIKILTESKISSVKQKGDM-VSVQV 266 (481)
Q Consensus 202 E~A----~~l--------~-~l-G~~Vtli~~~~~ll~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~-~~v~~ 266 (481)
T Consensus 377 ~YCSrvCCm~slKqA~~Iker~Pd~~v~I~YmDiRafG---~~yEefY~~~Q~~~GV~fIRG-rvaeI~e~p~~~liV~~ 452 (622)
T COG1148 377 PYCSRVCCMVSLKQAQLIKERYPDTDVTIYYMDIRAFG---KDYEEFYVRSQEDYGVRFIRG-RVAEIAEFPKKKLIVRV 452 (622)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC---CCHHHHHHHHHHHHCCEEECC-CEEEEEECCCCCEEEEE
T ss_conf 22448999999877899887589853899999712466---426999998788608536646-41016887998369998
Q ss_pred EE-CCCCEEEEECCCEEECCCCEEEE--ECCCCCCCCCCCC-CEEEEEC-CCC---EEECCCCEEECCCCCCCCCCCCCC
Q ss_conf 40-36740211023224305742200--0023222112357-3266424-874---230258588304445532444123
Q gi|254780675|r 267 ER-KDGSVSSMQAEKLLLSAGVQGNI--ENIGLEKIGVKTS-NGCIIVD-GYG---RTNVPGIYAIGDVAGAPMLAHKAE 338 (481)
Q Consensus 267 ~~-~dG~~~~i~~D~vl~a~Gr~Pn~--~~L~Le~~gi~~~-~g~i~vd-~~~---qTs~p~IyA~GDv~g~~~l~~~A~ 338 (481)
T Consensus 453 EdTl~g~~~e~~~DLVVLa~Gmep~~g~~ki-a~iLgL~~~~~gF~k~~hPkl~pv~s~~~GIflAG~aqgP-kdI~~si 530 (622)
T COG1148 453 EDTLTGEVKEIEADLVVLATGMEPSEGAKKI-AKILGLSQDEDGFLKEAHPKLRPVDSNRDGIFLAGAAQGP-KDIADSI 530 (622)
T ss_pred EECCCCCEECCCCCEEEEEECCCCCCCHHHH-HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC-CCHHHHH
T ss_conf 6034673111233379995044457656888-8754865178776034787766455567857981003698-4277888
Q ss_pred CCHHHHHHHH
Q ss_conf 2025555430
Q gi|254780675|r 339 HEGIICIEKI 348 (481)
Q Consensus 339 ~qg~~aa~~i 348 (481)
T Consensus 531 aqa~aAA~kA 540 (622)
T COG1148 531 AQAKAAAAKA 540 (622)
T ss_pred HHHHHHHHHH
T ss_conf 7767889989