HHsearch alignment for GI: 254780675 and conserved domain: COG3634

>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones].
Probab=91.21  E-value=0.16  Score=29.82  Aligned_cols=100  Identities=14%  Similarity=0.352  Sum_probs=65.5

Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEE-C-CCCCCC------------CCCCCCCCCCCHHHHHCCCCCCCCHHH
Q ss_conf             34443215654332100023210133310000-0-000122------------222221222100122012332210013
Q gi|254780675|r  187 TPKSLIVMGSGAIGVEFSSFYKSLDVDVSLIE-V-KDRILP------------VEDSEISQFVQRSLQKRGIKILTESKI  252 (481)
Q Consensus       187 ~p~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~-~-~~~ll~------------~~d~~~~~~~~~~l~~~Gv~i~~~~~v  252 (481)
T Consensus       210 ~~yDVLvVGgGPAgaaAAIYaARKGiRTGl~aerfGGQvldT~~IENfIsv~~teGpkl~~ale~Hv~~Y~vDimn~qra  289 (520)
T COG3634         210 DAYDVLVVGGGPAGAAAAIYAARKGIRTGLVAERFGGQVLDTMGIENFISVPETEGPKLAAALEAHVKQYDVDVMNLQRA  289 (520)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCEECCCCCHHHEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             88349998688631678999986121110015651882000003333005654546689999999876468245533434


Q ss_pred             HHHCCCC-CCCCEEEEECCCCEEEEECCCEEECCCCE
Q ss_conf             4420223-43101244036740211023224305742
Q gi|254780675|r  253 SSVKQKG-DMVSVQVERKDGSVSSMQAEKLLLSAGVQ  288 (481)
Q Consensus       253 ~~v~~~~-~~~~v~~~~~dG~~~~i~~D~vl~a~Gr~  288 (481)
T Consensus       290 ~~l~~a~~~~~l~ev~l~nGa--vLkaktvIlstGAr  324 (520)
T COG3634         290 SKLEPAAVEGGLIEVELANGA--VLKARTVILATGAR  324 (520)
T ss_pred             HCCEECCCCCCCEEEEECCCC--EECCCEEEEECCCC
T ss_conf             202015788860799954783--51131699842764