HHsearch alignment for GI: 254780675 and conserved domain: KOG0399

>KOG0399 consensus.
Probab=97.03  E-value=0.00015  Score=51.83  Aligned_cols=87  Identities=24%  Similarity=0.385  Sum_probs=66.9

Q ss_pred             CCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCC-------CC--CCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCC
Q ss_conf             443215654332100023210133310000000012-------22--222212221001220123322100134420223
Q gi|254780675|r  189 KSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRIL-------PV--EDSEISQFVQRSLQKRGIKILTESKISSVKQKG  259 (481)
Q Consensus       189 ~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll-------~~--~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~  259 (481)
T Consensus      1786 ~~vaiigsgpaglaaadqlnk~gh~v~vyer~dr~ggll~ygipnmkldk~vv~rrv~ll~~egi~f~tn~eigk~---- 1861 (2142)
T KOG0399        1786 KRVAIIGSGPAGLAAADQLNKAGHTVTVYERSDRVGGLLMYGIPNMKLDKFVVQRRVDLLEQEGIRFVTNTEIGKH---- 1861 (2142)
T ss_pred             CEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCC----
T ss_conf             4799974684146689998644767999971577674566168752132799999999988618548850322565----


Q ss_pred             CCCCEEEEECCCCEEEEECCCEEECCCCE
Q ss_conf             43101244036740211023224305742
Q gi|254780675|r  260 DMVSVQVERKDGSVSSMQAEKLLLSAGVQ  288 (481)
Q Consensus       260 ~~~~v~~~~~dG~~~~i~~D~vl~a~Gr~  288 (481)
T Consensus      1862 ----vs~---d~--l~~~~daiv~a~gst 1881 (2142)
T KOG0399        1862 ----VSL---DE--LKKENDAIVLATGST 1881 (2142)
T ss_pred             ----CCH---HH--HHHCCCEEEEEECCC
T ss_conf             ----567---88--753057599982788