HHsearch alignment for GI: 254780675 and conserved domain: KOG0399
>KOG0399 consensus.
Probab=97.03 E-value=0.00015 Score=51.83 Aligned_cols=87 Identities=24% Similarity=0.385 Sum_probs=66.9
Q ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCC-------CC--CCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCC
Q ss_conf 443215654332100023210133310000000012-------22--222212221001220123322100134420223
Q gi|254780675|r 189 KSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRIL-------PV--EDSEISQFVQRSLQKRGIKILTESKISSVKQKG 259 (481)
Q Consensus 189 ~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll-------~~--~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~ 259 (481)
T Consensus 1786 ~~vaiigsgpaglaaadqlnk~gh~v~vyer~dr~ggll~ygipnmkldk~vv~rrv~ll~~egi~f~tn~eigk~---- 1861 (2142)
T KOG0399 1786 KRVAIIGSGPAGLAAADQLNKAGHTVTVYERSDRVGGLLMYGIPNMKLDKFVVQRRVDLLEQEGIRFVTNTEIGKH---- 1861 (2142)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCC----
T ss_conf 4799974684146689998644767999971577674566168752132799999999988618548850322565----
Q ss_pred CCCCEEEEECCCCEEEEECCCEEECCCCE
Q ss_conf 43101244036740211023224305742
Q gi|254780675|r 260 DMVSVQVERKDGSVSSMQAEKLLLSAGVQ 288 (481)
Q Consensus 260 ~~~~v~~~~~dG~~~~i~~D~vl~a~Gr~ 288 (481)
T Consensus 1862 ----vs~---d~--l~~~~daiv~a~gst 1881 (2142)
T KOG0399 1862 ----VSL---DE--LKKENDAIVLATGST 1881 (2142)
T ss_pred ----CCH---HH--HHHCCCEEEEEECCC
T ss_conf ----567---88--753057599982788