HHsearch alignment for GI: 254780675 and conserved domain: PRK04965
>PRK04965 nitric oxide reductase; Provisional.
Probab=100.00 E-value=0 Score=358.20 Aligned_cols=355 Identities=18% Similarity=0.259 Sum_probs=251.6
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCC--CEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 9864348999898579999999998799--39999788886246325673708899999999999842117821348754
Q gi|254780675|r 1 MSRLYDIILIGSGPAGYVAAIRAAQLGF--KVAIVEYAGLGGICLNWGCIPTKSLLRSAEILDHIQNAQHYGLNVAGKVE 78 (481)
Q Consensus 1 Ms~~yDvvIIG~GpAG~~aA~~~a~~G~--~V~liEk~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~ 78 (481)
T Consensus 1 M~~~--IVIIG~G~AG~~aa~~lR~~d~~~~Itvi~~e~~~---~Y~rp~Ls~~~~~----------------------~ 53 (378)
T PRK04965 1 MSNG--IVIIGSGFAARQLVKNIRKQDAHIPITLITADSGD---EYNKPDLSHVFSQ----------------------G 53 (378)
T ss_pred CCCC--EEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCC---CCCCCCCHHHHCC----------------------C
T ss_conf 9899--99998829999999999711949869999899998---8767816698828----------------------9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEC
Q ss_conf 499999999999999853446876301414210000-0112222100236875200135555432258638997245525
Q gi|254780675|r 79 FNIEDIVKRSRDISHRLNRGVEFLMHKNKVDIIWGK-ATLKNPSEITVSKPSQPAVQPQHPIPKKVLGEGTYKAKHIIIA 157 (481)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~-a~f~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~a~~ivIA 157 (481)
T Consensus 54 ~~~~~l~----------~~~~~~~~~~~~I~l~~~~~V~~ID~~~k~V~-----------------~~g~~~~YDkLVLA 106 (378)
T PRK04965 54 QRADDLT----------RQSAGEFAEQFNLRLFPHTWVTDIDAEAQVVK-----------------SQGNQWQYDKLVLA 106 (378)
T ss_pred CCHHHHH----------CCCHHHHHHHCCEEEECCCEEEEECCCCCEEE-----------------ECCCEEECCEEEEE
T ss_conf 9968953----------17989998748979986989999846463799-----------------58919846879993
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEE---CC---CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCC-CCCC
Q ss_conf 75431110111345554221245211---13---33444321565433210002321013331000000001222-2222
Q gi|254780675|r 158 TGARPRHIEGIEPDSHLIWTYFDALK---PS---KTPKSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRILPV-EDSE 230 (481)
Q Consensus 158 TGs~p~~~~g~~~~~~~~~t~~~~l~---l~---~~p~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll~~-~d~~ 230 (481)
T Consensus 107 TGa~p~~ppi-~G-~~~v~tlr~l~d~~~~~~~l~~~krvvVIGgG~IG~E~A~~L~~~G~~Vtvve~~~~ll~~~l~~~ 184 (378)
T PRK04965 107 TGASAFVPPV-PG-RELMLTLNSQQEYRACETQLRDAQRVLVVGGGLIGTELAMDLCRAGKAVTLVDNAASLLASLMPPE 184 (378)
T ss_pred CCCCCCCCCC-CC-CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHH
T ss_conf 5887557899-99-647998199999999997751497899989838899999999967988999766674422117899
Q ss_pred CCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCEEEEECCCEEECCCCEEEEECCCCCCCCCCCCCEEEEE
Q ss_conf 12221001220123322100134420223431012440367402110232243057422000023222112357326642
Q gi|254780675|r 231 ISQFVQRSLQKRGIKILTESKISSVKQKGDMVSVQVERKDGSVSSMQAEKLLLSAGVQGNIENIGLEKIGVKTSNGCIIV 310 (481)
Q Consensus 231 ~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~~~v~~~~~dG~~~~i~~D~vl~a~Gr~Pn~~~L~Le~~gi~~~~g~i~v 310 (481)
T Consensus 185 ~~~~l~~~l~~~GV~~~~~~~v~~i~~~~~~~~v~l--~dG--~~i~aD~Vv~a~Gv~Pnt~l--a~~aGl~~~~G-I~V 257 (378)
T PRK04965 185 VSSRLQHRLTEMGVHLLLKSQLQGLEKTESGIRATL--DDG--RSIEVDAVIAAAGLRPNTAL--ARRAGLAVNRG-ICV 257 (378)
T ss_pred HHHHHHHHHHHCCEEEEECCEEEEEEECCCEEEEEE--CCC--CEEECCEEEECCCCCCCHHH--HHHCCCCCCCC-EEE
T ss_conf 999999999978909996988999996599899998--599--79984999989477548278--98669866998-899
Q ss_pred CCCCEEECCCCEEECCCCC---C-CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEE-EHHHEEECCCHHHHHCC
Q ss_conf 4874230258588304445---5-32444123202555543024664432122320024543-03340001496876107
Q gi|254780675|r 311 DGYGRTNVPGIYAIGDVAG---A-PMLAHKAEHEGIICIEKIAGKSKVYPLDKSKIPGCTYC-NPQVASIGLTEEKARSQ 385 (481)
Q Consensus 311 d~~~qTs~p~IyA~GDv~g---~-~~l~~~A~~qg~~aa~~i~~~~~~~~~d~~~ip~~vft-~P~ia~vG~te~ea~~~ 385 (481)
T Consensus 258 d~~l~TS~p~IyA~GDcAe~~g~~~~~v~p~~~~a~~lA~~l~G~~~--~~~~~~~~~~~K~~~~~i~~~g~~~~~---- 331 (378)
T PRK04965 258 DSYLQTSAPDIYALGDCAEINGQVLPFLQPIQLSANALAKNLLGQNT--PLKLPAMLVKVKTPELPLQLAGETQRQ---- 331 (378)
T ss_pred CCCCCCCCCCEEEEEEEEEECCEEEEHHHHHHHHHHHHHHHHCCCCC--CCCCCCCEEEEEECCCCEEECCCCCCC----
T ss_conf 99985499999998752898999750289999999999997079985--310487358985068512864788899----
Q ss_pred CCCEEEEEEECCCCHHHHCCCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHH
Q ss_conf 97279999964638233207898218999998899859999998299889999
Q gi|254780675|r 386 GLDIRVGKHSFSANGKAITLGEDSGMIKTIFNNKTGEVLGVHMVGPEVTELIQ 438 (481)
Q Consensus 386 g~~~~~~~~~~~~~~~~~~~~~~~G~~kiv~~~~~~~ilG~~~~g~~A~eli~ 438 (481)
T Consensus 332 -------------~~~~~~~~~~~g~~~~~~~~-~g~l~G~vl~Gd~~~~~~~ 370 (378)
T PRK04965 332 -------------DLRWQINAESQGMVAKAFDE-AGQLRGFVVSEDRMKEAFP 370 (378)
T ss_pred -------------CCEEEEEECCCCEEEEEECC-CCCEEEEEEECHHHHHHHH
T ss_conf -------------84399995599808999946-9969999997888887778