HHsearch alignment for GI: 254780675 and conserved domain: PRK04965

Probab=97.89  E-value=1e-04  Score=53.13  Aligned_cols=96  Identities=15%  Similarity=0.337  Sum_probs=44.0

Q ss_pred             CCCCCCCCCCCCCCCHHHHHCCCC--CCCCEECCCCC------CCC-C--C---CCCCC-CCCHHHHHCCCCCCCCHHHH
Q ss_conf             443215654332100023210133--31000000001------222-2--2---22122-21001220123322100134
Q gi|254780675|r  189 KSLIVMGSGAIGVEFSSFYKSLDV--DVSLIEVKDRI------LPV-E--D---SEISQ-FVQRSLQKRGIKILTESKIS  253 (481)
Q Consensus       189 ~~ivIiGgG~ig~E~A~~l~~lG~--~Vtli~~~~~l------l~~-~--d---~~~~~-~~~~~l~~~Gv~i~~~~~v~  253 (481)
T Consensus         3 ~~IVIIG~G~AG~~aa~~lR~~d~~~~Itvi~~e~~~~Y~rp~Ls~~~~~~~~~~~l~~~~~~~~~~~~~I~l~~~~~V~   82 (378)
T PRK04965          3 NGIVIIGSGFAARQLVKNIRKQDAHIPITLITADSGDEYNKPDLSHVFSQGQRADDLTRQSAGEFAEQFNLRLFPHTWVT   82 (378)
T ss_pred             CCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCHHHHHCCCHHHHHHHCCEEEECCCEEE
T ss_conf             99999988299999999997119498699998999988767816698828999689531798999874897998698999


Q ss_pred             HHCCCCCCCCEEEEECCCCEEEEECCCEEECCCCEEEE
Q ss_conf             42022343101244036740211023224305742200
Q gi|254780675|r  254 SVKQKGDMVSVQVERKDGSVSSMQAEKLLLSAGVQGNI  291 (481)
Q Consensus       254 ~v~~~~~~~~v~~~~~dG~~~~i~~D~vl~a~Gr~Pn~  291 (481)
T Consensus        83 ~ID~~~k~--V~---~~g--~~~~YDkLVLATGa~p~~  113 (378)
T PRK04965         83 DIDAEAQV--VK---SQG--NQWQYDKLVLATGASAFV  113 (378)
T ss_pred             EECCCCCE--EE---ECC--CEEECCEEEEECCCCCCC
T ss_conf             98464637--99---589--198468799935887557