HHsearch alignment for GI: 254780675 and conserved domain: PRK09853

Probab=97.74  E-value=9e-06  Score=60.72  Aligned_cols=108  Identities=18%  Similarity=0.229  Sum_probs=70.2

Q ss_pred             CCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCC-------CC--CCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCC
Q ss_conf             443215654332100023210133310000000012-------22--222212221001220123322100134420223
Q gi|254780675|r  189 KSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRIL-------PV--EDSEISQFVQRSLQKRGIKILTESKISSVKQKG  259 (481)
Q Consensus       189 ~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll-------~~--~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~  259 (481)
T Consensus       551 KKVAVIGsGPAGLaAA~~Lar~Gh~VTVFEk~~~~GGmL~yGIP~fRLPk~vIdreI~~l~~~GV~f~tnv-----g~d-  624 (1032)
T PRK09853        551 HPVAVIGAGPAGLAAGYFLARAGHPVTVFEREENAGGVVKNIIPEFRIPAELIQHDIDFVAAHGVKFEYGC-----SPD-  624 (1032)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECC-----CCC-
T ss_conf             97999896889999999999779936998158978842673588767899999999999997796999699-----998-


Q ss_pred             CCCCEEEEECCCCEEEEECCCEEECCCC-EEEEECCCCCCCCCCCCCEEEEECCCCEE
Q ss_conf             4310124403674021102322430574-22000023222112357326642487423
Q gi|254780675|r  260 DMVSVQVERKDGSVSSMQAEKLLLSAGV-QGNIENIGLEKIGVKTSNGCIIVDGYGRT  316 (481)
Q Consensus       260 ~~~~v~~~~~dG~~~~i~~D~vl~a~Gr-~Pn~~~L~Le~~gi~~~~g~i~vd~~~qT  316 (481)
T Consensus       625 ----itle----~L~~eGyDAVfLa~GA~~~r--~L~IpGe----~~gV~~AleFL~~  668 (1032)
T PRK09853        625 ----LTVE----QLKNQGYHYVLLAIGADKNG--GLKLAGD----NQNVWKSLPFLRE  668 (1032)
T ss_pred             ----CCHH----HHHHCCCCEEEEECCCCCCC--CCCCCCC----CCCEEEHHHHHHH
T ss_conf             ----8899----99657999999945889888--7999986----5780777999998