HHsearch alignment for GI: 254780675 and conserved domain: PRK12416
>PRK12416 protoporphyrinogen oxidase; Provisional.
Probab=97.43 E-value=0.00028 Score=49.90 Aligned_cols=37 Identities=30% Similarity=0.556 Sum_probs=32.1
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEEC-CCCCE
Q ss_conf 98643489998985799999999987------993999978-88862
Q gi|254780675|r 1 MSRLYDIILIGSGPAGYVAAIRAAQL------GFKVAIVEY-AGLGG 40 (481)
Q Consensus 1 Ms~~yDvvIIG~GpAG~~aA~~~a~~------G~~V~liEk-~~~GG 40 (481)
T Consensus 1 Mk~---vaVIGgGISGLsaA~~L~~~~~~~~~~~~vtl~Eas~r~GG 44 (466)
T PRK12416 1 MKT---VVVIGGGITGLSTMFYLEKLKKDYNIDLNLILVEKEEYLGG 44 (466)
T ss_pred CCE---EEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCC
T ss_conf 975---99989978999999999872555589986799977998867