HHsearch alignment for GI: 254780675 and conserved domain: PRK12770
>PRK12770 putative glutamate synthase subunit beta; Provisional.
Probab=97.71 E-value=7.9e-06 Score=61.12 Aligned_cols=101 Identities=16% Similarity=0.184 Sum_probs=62.5
Q ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCC----CC-----CCCCCCCCCHHHHHCCCCCCCCHHHHHHCC--
Q ss_conf 4432156543321000232101333100000000122----22-----222122210012201233221001344202--
Q gi|254780675|r 189 KSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRILP----VE-----DSEISQFVQRSLQKRGIKILTESKISSVKQ-- 257 (481)
Q Consensus 189 ~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll~----~~-----d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~-- 257 (481)
T Consensus 18 kkV~IIGaGPaGlsAA~~aa~~G~~v~viEk~~~~GG~~~~gip~~~~p~~~~~~~~~~l~~~g~~~~~~~~v~~~~~~~ 97 (350)
T PRK12770 18 KKVAIIGAGPAGLAAAGYLACLGHEVHVYDKLPEPGGLMVFGIPEFRIPIERVREGVRELEELGVVFHTRTKVYCDEPPH 97 (350)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEECCEEEEEECCEE
T ss_conf 98999995588999999999789985999536969828998347976668899999999997097697320998502011
Q ss_pred --CCCCCCEEEEECCCCEEEEECCCEEECCCC-EEEE
Q ss_conf --234310124403674021102322430574-2200
Q gi|254780675|r 258 --KGDMVSVQVERKDGSVSSMQAEKLLLSAGV-QGNI 291 (481)
Q Consensus 258 --~~~~~~v~~~~~dG~~~~i~~D~vl~a~Gr-~Pn~ 291 (481)
T Consensus 98 ~~~~~~~~~~--~~~~~~~~~~~daviiAtG~~~~r~ 132 (350)
T PRK12770 98 EEEGDEFVED--FVSLEELVEEYDAVLIATGTWKSRK 132 (350)
T ss_pred EEECCEEEEE--EEEHHHHHHHCCEEEEECCCCCCCC
T ss_conf 3303203577--6018987741899999658997735