HHsearch alignment for GI: 254780675 and conserved domain: PRK12779
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional.
Probab=97.31 E-value=3.3e-05 Score=56.61 Aligned_cols=90 Identities=14% Similarity=0.201 Sum_probs=65.8
Q ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCC-------C--CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCC
Q ss_conf 443215654332100023210133310000000012-------2--2222212221001220123322100134420223
Q gi|254780675|r 189 KSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRIL-------P--VEDSEISQFVQRSLQKRGIKILTESKISSVKQKG 259 (481)
Q Consensus 189 ~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~ 259 (481)
T Consensus 307 ~kVAVIGsGPAGLs~A~~Lar~Gy~VTVFEalh~~GGvL~YGIPeFRLPK~IV~~EI~~l~~lGV~f~~n~~VGk~---- 382 (944)
T PRK12779 307 PPIAVVGSGPSGLINAYLLAVEGFPVTIFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVGKT---- 382 (944)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCEECCC----
T ss_conf 8679988576899999999977993399944787885589558766687899999999999678399978564776----
Q ss_pred CCCCEEEEECCCCEEEEECCCEEECCCC-EEE
Q ss_conf 4310124403674021102322430574-220
Q gi|254780675|r 260 DMVSVQVERKDGSVSSMQAEKLLLSAGV-QGN 290 (481)
Q Consensus 260 ~~~~v~~~~~dG~~~~i~~D~vl~a~Gr-~Pn 290 (481)
T Consensus 383 ----~tl~----eL~~eGydAVfIg~GAg~p~ 406 (944)
T PRK12779 383 ----ATLE----DLKAEGFWKIFVGTGAGLPT 406 (944)
T ss_pred ----CCHH----HHHHCCCCEEEEEECCCCCC
T ss_conf ----8899----99768999899974788875