HHsearch alignment for GI: 254780675 and conserved domain: PRK12810
>PRK12810 gltD glutamate synthase subunit beta; Reviewed.
Probab=100.00 E-value=3.2e-32 Score=252.88 Aligned_cols=280 Identities=24% Similarity=0.335 Sum_probs=183.7
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH-H
Q ss_conf 3489998985799999999987993999978-8886246325673708899999999999842117821348754499-9
Q gi|254780675|r 5 YDIILIGSGPAGYVAAIRAAQLGFKVAIVEY-AGLGGICLNWGCIPTKSLLRSAEILDHIQNAQHYGLNVAGKVEFNI-E 82 (481)
Q Consensus 5 yDvvIIG~GpAG~~aA~~~a~~G~~V~liEk-~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~-~ 82 (481)
T Consensus 144 kkVAVIGsGPAGLsaA~~Lar~G~~VtVfE~~~~~GGl--l~yGIP~----------------------------~RLpk 193 (472)
T PRK12810 144 KKVAVVGSGPAGLAAADQLARAGHKVTVFERDDRIGGL--LRYGIPD----------------------------FKLEK 193 (472)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCE--EEECCCC----------------------------CCCCH
T ss_conf 98999897789999999998669758997257777754--6531788----------------------------55535
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-C
Q ss_conf 999999999998534468763014142100000112222100236875200135555432258638997245525754-3
Q gi|254780675|r 83 DIVKRSRDISHRLNRGVEFLMHKNKVDIIWGKATLKNPSEITVSKPSQPAVQPQHPIPKKVLGEGTYKAKHIIIATGA-R 161 (481)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~a~f~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~a~~ivIATGs-~ 161 (481)
T Consensus 194 ~v~~~ei-----------~~l~~~GV~~~~n~~V--G~-dit~~----------------~L---~~~yDAV~la~Ga~~ 240 (472)
T PRK12810 194 DVIDRRI-----------ELMEGEGIEFRTGVEV--GK-DITAE----------------QL---LAEYDAVFLGGGAYK 240 (472)
T ss_pred HHHHHHH-----------HHHHHCCCEEEECEEC--CC-CCCHH----------------HH---HCCCCEEEEECCCCC
T ss_conf 8999999-----------9998579789905231--87-57699----------------98---505798999037787
Q ss_pred CCCCCCCCCCCCCCCCCCCCEE--------------CCCCCCCCCCCCCCCCCCCCHHHHHCCCC-CCCCEECCCCCCCC
Q ss_conf 1110111345554221245211--------------13334443215654332100023210133-31000000001222
Q gi|254780675|r 162 PRHIEGIEPDSHLIWTYFDALK--------------PSKTPKSLIVMGSGAIGVEFSSFYKSLDV-DVSLIEVKDRILPV 226 (481)
Q Consensus 162 p~~~~g~~~~~~~~~t~~~~l~--------------l~~~p~~ivIiGgG~ig~E~A~~l~~lG~-~Vtli~~~~~ll~~ 226 (481)
T Consensus 241 ~r~l~ipG~~~~GV~~A~dfL~~~~~~~~~~~~~~~~~~~Gk~VvVIGGGntAmD~arta~R~GA~~V~rr~~~~--mp~ 318 (472)
T PRK12810 241 PRDLGIPGRDLDGVHFAMDFLIQNTRVLGGEKDEPFILAKGKHVVVIGGGDTGMDCVGTSIRQGAKSVTQRDIMP--MPP 318 (472)
T ss_pred CCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECC--CCC
T ss_conf 852787776678858869999999875337876666322476589989866899999999973896899975114--881
Q ss_pred CCCCCCCC--------CCHHHHHCCCCCCCCHHHHHHCCCCCCCC-EEE---EE---------CCCCEEEEECCCEEECC
Q ss_conf 22221222--------10012201233221001344202234310-124---40---------36740211023224305
Q gi|254780675|r 227 EDSEISQF--------VQRSLQKRGIKILTESKISSVKQKGDMVS-VQV---ER---------KDGSVSSMQAEKLLLSA 285 (481)
Q Consensus 227 ~d~~~~~~--------~~~~l~~~Gv~i~~~~~v~~v~~~~~~~~-v~~---~~---------~dG~~~~i~~D~vl~a~ 285 (481)
T Consensus 319 ~~~~~~~~~~~~~~~~ev~~A~eEGv~~~~~~~p~~i~~~~g~v~gv~~~~~~~~~g~~~~~~~~g~e~~i~aD~VI~Ai 398 (472)
T PRK12810 319 SRRNKNNPWPYWPMKFEVSNAHEEGVEREFNVQTKEFEGENGKVTGVKVVETELGKGRRKFEPVPGSEFVLPADLVLLAM 398 (472)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEEEEEEEEEECCCCCCEEECCCCEEEEECCEEEECC
T ss_conf 32332372323346888999997488257335736998149869999999977617887625669954999899999988
Q ss_pred CCEEEEECCCCCCCCCCCC-CEEEEECC-CCEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 7422000023222112357-32664248-74230258588304445532444123202555543024
Q gi|254780675|r 286 GVQGNIENIGLEKIGVKTS-NGCIIVDG-YGRTNVPGIYAIGDVAGAPMLAHKAEHEGIICIEKIAG 350 (481)
Q Consensus 286 Gr~Pn~~~L~Le~~gi~~~-~g~i~vd~-~~qTs~p~IyA~GDv~g~~~l~~~A~~qg~~aa~~i~~ 350 (481)
T Consensus 399 Gq~~~~~~~-~~~~gl~~d~~G~i~vd~~~~~Ts~~gVFA~GD~~~G~~~vv~Ai~~Gr~AA~~I~~ 464 (472)
T PRK12810 399 GFTGPEPEW-LAQFGVELDERGRVAADEGAYQTSNPKVFAAGDMRRGQSLVVWAIAEGRQAARAIDA 464 (472)
T ss_pred CCCCCCCCC-CCCCCCEECCCCCEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 888886322-225680287999888689987459999998368777816999999999999999999