HHsearch alignment for GI: 254780675 and conserved domain: PRK12814
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional.
Probab=100.00 E-value=3.8e-33 Score=259.56 Aligned_cols=274 Identities=22% Similarity=0.366 Sum_probs=190.3
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH-H
Q ss_conf 489998985799999999987993999978-88862463256737088999999999998421178213487544999-9
Q gi|254780675|r 6 DIILIGSGPAGYVAAIRAAQLGFKVAIVEY-AGLGGICLNWGCIPTKSLLRSAEILDHIQNAQHYGLNVAGKVEFNIE-D 83 (481)
Q Consensus 6 DvvIIG~GpAG~~aA~~~a~~G~~V~liEk-~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~-~ 83 (481)
T Consensus 195 kVAIIGaGPAGLsaAy~L~~~Gh~VTVfE~~~~~GGm-------------------------lryGI-----P~yRLPk~ 244 (652)
T PRK12814 195 KVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGM-------------------------MRYGI-----PRFRLPES 244 (652)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCE-------------------------EEECC-----CCCCCCHH
T ss_conf 7999683789999999999779906998158888986-------------------------76448-----63338999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC-C
Q ss_conf 999999999985344687630141421000001122221002368752001355554322586389972455257543-1
Q gi|254780675|r 84 IVKRSRDISHRLNRGVEFLMHKNKVDIIWGKATLKNPSEITVSKPSQPAVQPQHPIPKKVLGEGTYKAKHIIIATGAR-P 162 (481)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~a~f~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~a~~ivIATGs~-p 162 (481)
T Consensus 245 vld~E----------I~~-i~~~GV~~~~n~~v--G-~ditl~~----------------L---~~~yDAVflaiGa~~~ 291 (652)
T PRK12814 245 VIDAD----------IAP-LRAMGAEFRFNTVF--G-RDITLEE----------------L---QKEFDAVLLAVGAQKA 291 (652)
T ss_pred HHHHH----------HHH-HHHCCCEEEEEEEE--C-CCCCHHH----------------H---HHHCCEEEEEECCCCC
T ss_conf 99999----------999-99719858866794--7-7477999----------------9---8658999997557877
Q ss_pred CCCCCCCCCCCCCCCCCCCEE------CCCCCCCCCCCCCCCCCCCCHHHHHCCCCC-CCCEECCCC-CCCCCCCCCCCC
Q ss_conf 110111345554221245211------133344432156543321000232101333-100000000-122222221222
Q gi|254780675|r 163 RHIEGIEPDSHLIWTYFDALK------PSKTPKSLIVMGSGAIGVEFSSFYKSLDVD-VSLIEVKDR-ILPVEDSEISQF 234 (481)
Q Consensus 163 ~~~~g~~~~~~~~~t~~~~l~------l~~~p~~ivIiGgG~ig~E~A~~l~~lG~~-Vtli~~~~~-ll~~~d~~~~~~ 234 (481)
T Consensus 292 r~L~ipGedl~gV~~avdfL~~v~~g~~~~~GkkVvVIGGGNtAmD~ARTA~RlGA~~VtivyRRt~~eMpA~~~Ei--- 368 (652)
T PRK12814 292 SKMGIPGEELPGVISGIDFLRNVALGTALHPGKKVVVIGGGNTAIDAARTALRLGAESVTILYRRTREEMPANRAEI--- 368 (652)
T ss_pred CCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCHHHH---
T ss_conf 44798888787727689999985269866678852486688138999999987489758998337633199986777---
Q ss_pred CCHHHHHCCCCCCCCHHHHHHCCCCCCCCEE---EEE-------------CCCCEEEEECCCEEECCCCEEEEECCCCCC
Q ss_conf 1001220123322100134420223431012---440-------------367402110232243057422000023222
Q gi|254780675|r 235 VQRSLQKRGIKILTESKISSVKQKGDMVSVQ---VER-------------KDGSVSSMQAEKLLLSAGVQGNIENIGLEK 298 (481)
Q Consensus 235 ~~~~l~~~Gv~i~~~~~v~~v~~~~~~~~v~---~~~-------------~dG~~~~i~~D~vl~a~Gr~Pn~~~L~Le~ 298 (481)
T Consensus 369 -~eA-~eEGV~~~~l~~P~~i~~~~g~~~~~~~~~~~ge~D~sGR~~pv~v~gse~~i~aD~VI~AIGQ~~d~~~--~~~ 444 (652)
T PRK12814 369 -EEA-LAEGVSLRELAAPVSIERSEGGLELTAIKMQQGEPDESGRRRPVPVEGSEFTLQADTVISAIGQQVDPPI--AEA 444 (652)
T ss_pred -HHH-HHCCCCEEECCCCEEEEEECCCEEEEEEEEEEEEECCCCCEEEEECCCCEEEEECCEEEECCCCCCCCCH--HHC
T ss_conf -788-8679846976155899986896899999999968878897724565996699617889984587888332--224
Q ss_pred CCCCCCC-EEEEEC-CCCEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 1123573-266424-87423025858830444553244412320255554302
Q gi|254780675|r 299 IGVKTSN-GCIIVD-GYGRTNVPGIYAIGDVAGAPMLAHKAEHEGIICIEKIA 349 (481)
Q Consensus 299 ~gi~~~~-g~i~vd-~~~qTs~p~IyA~GDv~g~~~l~~~A~~qg~~aa~~i~ 349 (481)
T Consensus 445 ~gl~~~~~G~i~vd~~t~~Ts~~gVFAgGD~v~Gp~tvV~AIa~Gr~AA~~Id 497 (652)
T PRK12814 445 AGIGTSRNGTVKVDPETLQTSVAGVFAGGDCVTGADIAINAVEQGKRAAHAID 497 (652)
T ss_pred CCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 58636689988858888743999999898887684499999999999999999