HHsearch alignment for GI: 254780675 and conserved domain: TIGR01320
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase; InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase . ; GO: 0008924 malate dehydrogenase (acceptor) activity, 0006099 tricarboxylic acid cycle.
Probab=94.46 E-value=0.018 Score=36.78 Aligned_cols=96 Identities=25% Similarity=0.450 Sum_probs=69.6
Q ss_pred CCCCCHHHHHC-CCCCCCCHHHHHHCCCCC-CCCEEEEE-CC-CCEEEEECCCEEECCCCEEEEECCC-CCCCCCCCCC-
Q ss_conf 22210012201-233221001344202234-31012440-36-7402110232243057422000023-2221123573-
Q gi|254780675|r 232 SQFVQRSLQKR-GIKILTESKISSVKQKGD-MVSVQVER-KD-GSVSSMQAEKLLLSAGVQGNIENIG-LEKIGVKTSN- 305 (481)
Q Consensus 232 ~~~~~~~l~~~-Gv~i~~~~~v~~v~~~~~-~~~v~~~~-~d-G~~~~i~~D~vl~a~Gr~Pn~~~L~-Le~~gi~~~~- 305 (481)
T Consensus 181 t~Ql~~~~~~~PG~~~~yg~~V~~l~r~sD~~W~vt~~d~r~PG~~~~l~a~FvFlGAGG----~AL~lLq~SGIpevKG 256 (487)
T TIGR01320 181 TKQLLKYLEQEPGTKIRYGHEVKDLKRESDGAWVVTVKDTRTPGGKRTLKARFVFLGAGG----GALPLLQKSGIPEVKG 256 (487)
T ss_pred HHHHHHHHHCCCCCEEECCCCEEHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEECCC----CHHHHHHHCCCCCCCC
T ss_conf 999999970289816763850001101058853788412208887626766778971574----1688988667987665
Q ss_pred --EEEEECCCCEEECCC--------CEEECCCC-CCCCC
Q ss_conf --266424874230258--------58830444-55324
Q gi|254780675|r 306 --GCIIVDGYGRTNVPG--------IYAIGDVA-GAPML 333 (481)
Q Consensus 306 --g~i~vd~~~qTs~p~--------IyA~GDv~-g~~~l 333 (481)
T Consensus 257 FaGFPvSG~fLR~~Npe~~~qH~AKVY--G~A~vGAPPm 293 (487)
T TIGR01320 257 FAGFPVSGLFLRCSNPELVEQHRAKVY--GQASVGAPPM 293 (487)
T ss_pred CCCCCCCCEECCCCCHHHHHHHCCCCC--CCCCCCCCCC
T ss_conf 336575550001788799985056215--7788764888