HHsearch alignment for GI: 254780675 and conserved domain: TIGR01350

>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase; InterPro: IPR006258 These sequences represent dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulphide. ; GO: 0004148 dihydrolipoyl dehydrogenase activity, 0050660 FAD binding, 0006118 electron transport.
Probab=97.81  E-value=0.00019  Score=51.13  Aligned_cols=95  Identities=26%  Similarity=0.403  Sum_probs=61.7

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             89998985799999999987993999978-88862463256737088999999999998421178213487544999999
Q gi|254780675|r    7 IILIGSGPAGYVAAIRAAQLGFKVAIVEY-AGLGGICLNWGCIPTKSLLRSAEILDHIQNAQHYGLNVAGKVEFNIEDIV   85 (481)
Q Consensus         7 vvIIG~GpAG~~aA~~~a~~G~~V~liEk-~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~   85 (481)
T Consensus       181 lvIiGGGVIG~EfA~~f~~lG~~VTv~E~~drI-----------------------------------L--p~~D-----  218 (481)
T TIGR01350       181 LVIIGGGVIGVEFASIFASLGVKVTVIEMLDRI-----------------------------------L--PGED-----  218 (481)
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC-----------------------------------C--CCCC-----
T ss_conf             699878667788999998539808999457500-----------------------------------3--5431-----


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCC-EEEECCCCCC-----CCCCCCC--CCCCCCCCCCCCCCCCCCCCCC-EEEEEEEEEE
Q ss_conf             9999999985344687630141-4210000011-----2222100--2368752001355554322586-3899724552
Q gi|254780675|r   86 KRSRDISHRLNRGVEFLMHKNK-VDIIWGKATL-----KNPSEIT--VSKPSQPAVQPQHPIPKKVLGE-GTYKAKHIII  156 (481)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~-v~~~~G~a~f-----~~~~~v~--v~~~~~~~~~~~~~~~~~~~~~-~~~~a~~ivI  156 (481)
T Consensus       219 -------~evSk~~~~~L~~~GNv~i~~~~~V~~~~~~~~~~~v~~~~~~~g--------------~ge~~~~~~e~vLv  277 (481)
T TIGR01350       219 -------AEVSKVVKKKLKKKGNVKILTNAKVTGAAVEKNDDQVVVEVELEG--------------KGEVETLTAEKVLV  277 (481)
T ss_pred             -------HHHHHHHHHHHHHCCCEEEECCCEEECCEEEECCCEEEEEEEECC--------------CCCEEEEEEEEEEE
T ss_conf             -------689999999997449849854854423357752878999999879--------------98058898739999


Q ss_pred             CCCCCCCC
Q ss_conf             57543111
Q gi|254780675|r  157 ATGARPRH  164 (481)
Q Consensus       157 ATGs~p~~  164 (481)
T Consensus       278 avGR~pn~  285 (481)
T TIGR01350       278 AVGRKPNT  285 (481)
T ss_pred             EECCCCCC
T ss_conf             84243476