HHsearch alignment for GI: 254780675 and conserved domain: TIGR02731

>TIGR02731 phytoene_desat phytoene desaturase; InterPro: IPR014102 Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme phytoene desaturase (also called phytoene dehydrogenase). This HMM does not include plant chloroplast transit peptides and the entry does not contain zeta-carotene desaturase, which is a closely related family in the same pathway..
Probab=94.02  E-value=0.089  Score=31.70  Aligned_cols=73  Identities=10%  Similarity=0.164  Sum_probs=48.2

Q ss_pred             CCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEEC--CC-CEEEEECCCEEECCC
Q ss_conf             133310000000012222222122210012201233221001344202234310124403--67-402110232243057
Q gi|254780675|r  210 LDVDVSLIEVKDRILPVEDSEISQFVQRSLQKRGIKILTESKISSVKQKGDMVSVQVERK--DG-SVSSMQAEKLLLSAG  286 (481)
Q Consensus       210 lG~~Vtli~~~~~ll~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~~~v~~~~~--dG-~~~~i~~D~vl~a~G  286 (481)
T Consensus       200 ~Gsk~afldG~P~------erlC~P~v~~~~~~GGe~~~~~~l~~i~l~~d~~v~~f~~~~~~g~~~~~~~~d~y~~a~~  273 (454)
T TIGR02731       200 YGSKIAFLDGAPP------ERLCQPIVDYITSRGGEVRLNARLKEIVLNEDGSVKAFALADGEGKDSFEVTADAYVSALP  273 (454)
T ss_pred             CCCEEEEECCCCH------HHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEHEEEECCCCCCCCEEECCCEEEHHH
T ss_conf             4771676268880------4555789999972488166413100134357762100022044564200111010011112


Q ss_pred             CE
Q ss_conf             42
Q gi|254780675|r  287 VQ  288 (481)
Q Consensus       287 r~  288 (481)
T Consensus       274 vd  275 (454)
T TIGR02731       274 VD  275 (454)
T ss_pred             HH
T ss_conf             56