HHsearch alignment for GI: 254780675 and conserved domain: pfam03486

>pfam03486 HI0933_like HI0933-like protein.
Probab=98.09  E-value=9.9e-07  Score=67.69  Aligned_cols=82  Identities=27%  Similarity=0.433  Sum_probs=59.4

Q ss_pred             HHHHHCCCCCCCCEECCCCCCCCCC--CCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCC-CCEEEEECCCCEEEEECCC
Q ss_conf             0232101333100000000122222--221222100122012332210013442022343-1012440367402110232
Q gi|254780675|r  204 SSFYKSLDVDVSLIEVKDRILPVED--SEISQFVQRSLQKRGIKILTESKISSVKQKGDM-VSVQVERKDGSVSSMQAEK  280 (481)
Q Consensus       204 A~~l~~lG~~Vtli~~~~~ll~~~d--~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~-~~v~~~~~dG~~~~i~~D~  280 (481)
T Consensus        82 ~~ff~~~Gl~~-~~e~~GrvfP~s~~A~~Vl~~L~~~l~~~gV~i~~~~~V~~I~~~~~~~~~v~~--~---~~~~~a~~  155 (405)
T pfam03486        82 IAWFEELGVPL-KEEDHGRLFPVSDKASDIVDALLNELKELGVKIRTRTRVLSVEKDDDGRFRVDT--G---GEELEADS  155 (405)
T ss_pred             HHHHHHCCCEE-EECCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCEEEEEE--C---CCEEEECE
T ss_conf             99999779905-977899797898986999999999999779789958887899975994599994--8---95897278


Q ss_pred             EEECCCCE--EEE
Q ss_conf             24305742--200
Q gi|254780675|r  281 LLLSAGVQ--GNI  291 (481)
Q Consensus       281 vl~a~Gr~--Pn~  291 (481)
T Consensus       156 vIlAtGG~s~p~~  168 (405)
T pfam03486       156 LVLATGGLSWPKT  168 (405)
T ss_pred             EEEECCCCCCCCC
T ss_conf             9990488665655