HHsearch alignment for GI: 254780675 and conserved domain: pfam03486
>pfam03486 HI0933_like HI0933-like protein.
Probab=98.09 E-value=9.9e-07 Score=67.69 Aligned_cols=82 Identities=27% Similarity=0.433 Sum_probs=59.4
Q ss_pred HHHHHCCCCCCCCEECCCCCCCCCC--CCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCC-CCEEEEECCCCEEEEECCC
Q ss_conf 0232101333100000000122222--221222100122012332210013442022343-1012440367402110232
Q gi|254780675|r 204 SSFYKSLDVDVSLIEVKDRILPVED--SEISQFVQRSLQKRGIKILTESKISSVKQKGDM-VSVQVERKDGSVSSMQAEK 280 (481)
Q Consensus 204 A~~l~~lG~~Vtli~~~~~ll~~~d--~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~-~~v~~~~~dG~~~~i~~D~ 280 (481)
T Consensus 82 ~~ff~~~Gl~~-~~e~~GrvfP~s~~A~~Vl~~L~~~l~~~gV~i~~~~~V~~I~~~~~~~~~v~~--~---~~~~~a~~ 155 (405)
T pfam03486 82 IAWFEELGVPL-KEEDHGRLFPVSDKASDIVDALLNELKELGVKIRTRTRVLSVEKDDDGRFRVDT--G---GEELEADS 155 (405)
T ss_pred HHHHHHCCCEE-EECCCCEEECCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCEEEEEE--C---CCEEEECE
T ss_conf 99999779905-977899797898986999999999999779789958887899975994599994--8---95897278
Q ss_pred EEECCCCE--EEE
Q ss_conf 24305742--200
Q gi|254780675|r 281 LLLSAGVQ--GNI 291 (481)
Q Consensus 281 vl~a~Gr~--Pn~ 291 (481)
T Consensus 156 vIlAtGG~s~p~~ 168 (405)
T pfam03486 156 LVLATGGLSWPKT 168 (405)
T ss_pred EEEECCCCCCCCC
T ss_conf 9990488665655