HHsearch alignment for GI: 254780676 and conserved domain: COG0119
>COG0119 LeuA Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism].
Probab=92.55 E-value=1.2 Score=26.28 Aligned_cols=159 Identities=11% Similarity=0.060 Sum_probs=95.8
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCCCCCCHHHHHHHHH
Q ss_conf 988882357999999997077518985054453453258999999999985335---86899815462344689998741
Q gi|254780676|r 110 PQPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAP---STTIEVLTPDFLRKPHALEKVVS 186 (329)
Q Consensus 110 P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P---~~~IEvLiPDf~G~~~al~~v~~ 186 (329)
T Consensus 18 ~~~~s~e~Ki~Ia~~Ld~lGv~~IE~g~p~~----s~~~~~~~~~i~~---~~~~~~~~~~~~~~~~---~~~~~ea~~~ 87 (409)
T COG0119 18 GVSFSVEEKIRIAKALDDLGVDYIEAGFPVA----SPGDFEFVRAIAE---KAGLFICALIAALARA---IKRDIEALLE 87 (409)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEECCCC----CHHHHHHHHHHHH---HCCCCCCCHHHHHHHH---HHHHHHHHHH
T ss_conf 9957889999999999976998799727868----8546999999987---4686322022331786---7755999975
Q ss_pred CCCHHHHHCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 070233201383000275638---97035899999999997089167014048876420688999999999669939975
Q gi|254780676|r 187 AKPDVFNHNLETVASNYLMVR---PGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTM 263 (329)
Q Consensus 187 A~pdV~nHNiETV~rLy~~VR---p~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTi 263 (329)
T Consensus 88 a~~~~i~if~~tSd~h~~~~~~~t~~e~l~~~~~~v~~a~~~g~~~~--~~~Ed~~rt~~e~l~~~~~~~~~~ga~~i~l 165 (409)
T COG0119 88 AGVDRIHIFIATSDLHLRYKLKKTREEVLERAVDAVEYARDHGLEVR--FSAEDATRTDPEFLAEVVKAAIEAGADRINL 165 (409)
T ss_pred CCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEE--EEEECCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 79998999974788999988489999999999999999997397589--8753133679999999999999719949997
Q ss_pred CHHCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 022278610078000238469999999
Q gi|254780676|r 264 GQYLQPTRKHHKVESFVTPQDFKSYET 290 (329)
Q Consensus 264 GQYL~Ps~~h~pV~ryv~P~eF~~~~~ 290 (329)
T Consensus 166 ~D----------TvG~~~P~~~~~~i~ 182 (409)
T COG0119 166 PD----------TVGVATPNEVADIIE 182 (409)
T ss_pred CC----------CCCCCCHHHHHHHHH
T ss_conf 78----------768658799999999