HHsearch alignment for GI: 254780676 and conserved domain: COG0635
>COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism].
Probab=96.92 E-value=0.057 Score=35.51 Aligned_cols=214 Identities=13% Similarity=0.193 Sum_probs=136.3
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCHHH------HHHHHHHHHHHCCCEEEEECCCC-----CCCCCCHHHHHHHHH
Q ss_conf 6999866522353522344678998888235------79999999970775189850544-----534532589999999
Q gi|254780676|r 87 ATFMILGAICTRACTFCNVATGKPQPLDPQE------PENISWAVRSMKLSHVVITSVDR-----DDLDDGGAQHFAEVI 155 (329)
Q Consensus 87 ATFMilG~~CTR~C~FC~V~~G~P~~~D~~E------P~rvA~av~~l~Lk~vViTSV~R-----DDL~DgGA~hfa~~I 155 (329)
T Consensus 35 ~slYiHiPFC~~~C~YC~fn~~~~~~~~~~~~Y~~aL~~Ei~~~~~~~~~~-~~v~ti~~GGGTPslL---~~~~l~~ll 110 (416)
T COG0635 35 LSLYIHIPFCVSKCPYCDFNSHVTKRGQPVDEYLDALLEEIELVAALLGGQ-REVKTIYFGGGTPSLL---SPEQLERLL 110 (416)
T ss_pred CEEEEECCCHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC-CEEEEEEECCCCCCCC---CHHHHHHHH
T ss_conf 368887232125088788854534777739999999999999988622788-7278999769832677---999999999
Q ss_pred HHHHHHC------CCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf 9998533------5868998154623446899987410702332013830-00275638970358999999999970891
Q gi|254780676|r 156 SAIRESA------PSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPL 228 (329)
Q Consensus 156 ~~Ir~~~------P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~ 228 (329)
T Consensus 111 ~~l~~~~~~~~~~~EitiE~-nP~-~~~~e~~~~l~~~GvNRiSlGVQsf~~~~lk~lgR~h~~~~~~~a~~~~~~~g~~ 188 (416)
T COG0635 111 KALRELFNDLDPDAEITIEA-NPG-TVEAEKFKALKEAGVNRISLGVQSFNDEVLKALGRIHDEEEAKEAVELARKAGFT 188 (416)
T ss_pred HHHHHHHCCCCCCCEEEEEE-CCC-CCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 99999723578882799950-888-6689999999982987798601459989999747888789999999999863897
Q ss_pred EEECCCEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHHCC-C-CCCCCCCC--CCCCH-H----HHHHHHHHHHHCCCC
Q ss_conf 67014048876-42068899999999966993997502227-8-61007800--02384-6----999999999974962
Q gi|254780676|r 229 IFTKSGIMLGL-GETRNEILQLMDDLRTADVDFLTMGQYLQ-P-TRKHHKVE--SFVTP-Q----DFKSYETIAYSKGFL 298 (329)
Q Consensus 229 i~TKSGlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL~-P-s~~h~pV~--ryv~P-~----eF~~~~~~a~~~Gf~ 298 (329)
T Consensus 189 ~i-n~DLIyglP~QT~~~~~~~l~~a~~l~pdhis~y~L~~~p~t~~~~~~~~~~~lP~~d~~~~~~~~~~e~L~~~Gy~ 267 (416)
T COG0635 189 SI-NIDLIYGLPGQTLESLKEDLEQALELGPDHLSLYSLAIEPGTKFAQRKIKGKALPDEDEKADMYELVEELLEKAGYR 267 (416)
T ss_pred CE-EEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
T ss_conf 47-88724389999999999999999834998786462686588567662335778998689999999999999977964
Q ss_pred EEECCCCCC
Q ss_conf 434048300
Q gi|254780676|r 299 MVSASPLTR 307 (329)
Q Consensus 299 ~V~SgPlVR 307 (329)
T Consensus 268 ~yeisnfa~ 276 (416)
T COG0635 268 QYEISNFAK 276 (416)
T ss_pred HEECHHHCC
T ss_conf 106123127