HHsearch alignment for GI: 254780676 and conserved domain: COG0635

>COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism].
Probab=96.92  E-value=0.057  Score=35.51  Aligned_cols=214  Identities=13%  Similarity=0.193  Sum_probs=136.3

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCCCCHHH------HHHHHHHHHHHCCCEEEEECCCC-----CCCCCCHHHHHHHHH
Q ss_conf             6999866522353522344678998888235------79999999970775189850544-----534532589999999
Q gi|254780676|r   87 ATFMILGAICTRACTFCNVATGKPQPLDPQE------PENISWAVRSMKLSHVVITSVDR-----DDLDDGGAQHFAEVI  155 (329)
Q Consensus        87 ATFMilG~~CTR~C~FC~V~~G~P~~~D~~E------P~rvA~av~~l~Lk~vViTSV~R-----DDL~DgGA~hfa~~I  155 (329)
T Consensus        35 ~slYiHiPFC~~~C~YC~fn~~~~~~~~~~~~Y~~aL~~Ei~~~~~~~~~~-~~v~ti~~GGGTPslL---~~~~l~~ll  110 (416)
T COG0635          35 LSLYIHIPFCVSKCPYCDFNSHVTKRGQPVDEYLDALLEEIELVAALLGGQ-REVKTIYFGGGTPSLL---SPEQLERLL  110 (416)
T ss_pred             CEEEEECCCHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC-CEEEEEEECCCCCCCC---CHHHHHHHH
T ss_conf             368887232125088788854534777739999999999999988622788-7278999769832677---999999999


Q ss_pred             HHHHHHC------CCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf             9998533------5868998154623446899987410702332013830-00275638970358999999999970891
Q gi|254780676|r  156 SAIRESA------PSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPL  228 (329)
Q Consensus       156 ~~Ir~~~------P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~  228 (329)
T Consensus       111 ~~l~~~~~~~~~~~EitiE~-nP~-~~~~e~~~~l~~~GvNRiSlGVQsf~~~~lk~lgR~h~~~~~~~a~~~~~~~g~~  188 (416)
T COG0635         111 KALRELFNDLDPDAEITIEA-NPG-TVEAEKFKALKEAGVNRISLGVQSFNDEVLKALGRIHDEEEAKEAVELARKAGFT  188 (416)
T ss_pred             HHHHHHHCCCCCCCEEEEEE-CCC-CCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
T ss_conf             99999723578882799950-888-6689999999982987798601459989999747888789999999999863897


Q ss_pred             EEECCCEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHHCC-C-CCCCCCCC--CCCCH-H----HHHHHHHHHHHCCCC
Q ss_conf             67014048876-42068899999999966993997502227-8-61007800--02384-6----999999999974962
Q gi|254780676|r  229 IFTKSGIMLGL-GETRNEILQLMDDLRTADVDFLTMGQYLQ-P-TRKHHKVE--SFVTP-Q----DFKSYETIAYSKGFL  298 (329)
Q Consensus       229 i~TKSGlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL~-P-s~~h~pV~--ryv~P-~----eF~~~~~~a~~~Gf~  298 (329)
T Consensus       189 ~i-n~DLIyglP~QT~~~~~~~l~~a~~l~pdhis~y~L~~~p~t~~~~~~~~~~~lP~~d~~~~~~~~~~e~L~~~Gy~  267 (416)
T COG0635         189 SI-NIDLIYGLPGQTLESLKEDLEQALELGPDHLSLYSLAIEPGTKFAQRKIKGKALPDEDEKADMYELVEELLEKAGYR  267 (416)
T ss_pred             CE-EEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
T ss_conf             47-88724389999999999999999834998786462686588567662335778998689999999999999977964


Q ss_pred             EEECCCCCC
Q ss_conf             434048300
Q gi|254780676|r  299 MVSASPLTR  307 (329)
Q Consensus       299 ~V~SgPlVR  307 (329)
T Consensus       268 ~yeisnfa~  276 (416)
T COG0635         268 QYEISNFAK  276 (416)
T ss_pred             HEECHHHCC
T ss_conf             106123127