HHsearch alignment for GI: 254780676 and conserved domain: COG1533

Probab=97.28  E-value=0.019  Score=38.87  Aligned_cols=195  Identities=13%  Similarity=0.097  Sum_probs=115.1

Q ss_pred             CCCCCCCCCCCCCCC-CCCC--CC-CHHHHHHHHHHHHHH----CCC--EEEEECCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             652235352234467-8998--88-823579999999970----775--1898505445345325899999999998533
Q gi|254780676|r   93 GAICTRACTFCNVAT-GKPQ--PL-DPQEPENISWAVRSM----KLS--HVVITSVDRDDLDDGGAQHFAEVISAIRESA  162 (329)
Q Consensus        93 G~~CTR~C~FC~V~~-G~P~--~~-D~~EP~rvA~av~~l----~Lk--~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~  162 (329)
T Consensus        36 y~GC~h~C~YCYa~~~~~~~~~~~~~v~vk~n~~e~l~~el~~~~~k~~~i~is~~TDpyqp~E~~~~ltR~ilei~~~~  115 (297)
T COG1533          36 YRGCSHGCIYCYARPMHGYLPKSPTKVNVKENLLELLERELRKPGPKRTVIAISSVTDPYQPIEKEYRLTRKILEILLKY  115 (297)
T ss_pred             CCCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             47877888413362014665678605540156999999887524678559998546888856477878999999998853


Q ss_pred             CCCEEEEEC--CCCCCCHHHHHHHHHCCCHHHHHCCCCCC-CCCCCCCC-CCHHHHHHHHHHHHHHCCCEEEECCCEEEE
Q ss_conf             586899815--46234468999874107023320138300-02756389-703589999999999708916701404887
Q gi|254780676|r  163 PSTTIEVLT--PDFLRKPHALEKVVSAKPDVFNHNLETVA-SNYLMVRP-GARYFHSLRLLQRVKELDPLIFTKSGIMLG  238 (329)
Q Consensus       163 P~~~IEvLi--PDf~G~~~al~~v~~A~pdV~nHNiETV~-rLy~~VRp-~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvG  238 (329)
T Consensus       116 -~~~v~I~TKS~lv~RDld~l~~~~~~~~v~V~~Sitt~d~~l~k~~EP~apsp~~Ri~al~~l~eaG--i~--~~v~v~  190 (297)
T COG1533         116 -GFPVSIVTKSALVLRDLDLLLELAERGKVRVAVSITTLDEELAKILEPRAPSPEERLEALKELSEAG--IP--VGLFVA  190 (297)
T ss_pred             -CCCEEEEECCCCHHCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHCC--CE--EEEEEE
T ss_conf             -9967999777410102789984011265189999516848889865899969899999999999879--84--899985


Q ss_pred             ---EEECHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             ---6420688999999999669939975022278610078000238469999999999
Q gi|254780676|r  239 ---LGETRNEILQLMDDLRTADVDFLTMGQYLQPTRKHHKVESFVTPQDFKSYETIAY  293 (329)
Q Consensus       239 ---LGEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps~~h~pV~ryv~P~eF~~~~~~a~  293 (329)
T Consensus       191 PIiP~~~d~e~e~~l~~~~~ag~~~v~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (297)
T COG1533         191 PIIPGLNDEELERILEAAAEAGARVVVYG-TLRLRLDILRRFKEYLKRIEPERYRLYL  247 (297)
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEE-EEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             53078875889999999997577413631-3304577899999988875103576665