HHsearch alignment for GI: 254780676 and conserved domain: KOG1939

>KOG1939 consensus.
Probab=93.16  E-value=0.14  Score=32.80  Aligned_cols=123  Identities=21%  Similarity=0.202  Sum_probs=83.5

Q ss_pred             CCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CC-CEEEECCCEEEEEEE--CHHHHHHHH
Q ss_conf             34468999874107023320138300027563897035899999999997-08-916701404887642--068899999
Q gi|254780676|r  175 LRKPHALEKVVSAKPDVFNHNLETVASNYLMVRPGARYFHSLRLLQRVKE-LD-PLIFTKSGIMLGLGE--TRNEILQLM  250 (329)
Q Consensus       175 ~G~~~al~~v~~A~pdV~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~-~~-~~i~TKSGlMvGLGE--t~eEi~e~l  250 (329)
T Consensus        98 kGFkdll~IGnQaRP~iFdl~i~kp~~LY~~VvEv---deRV~l~~~~~~~~~~~~~~~~sGe~~rv~kk~De~alr~~L  174 (1247)
T KOG1939          98 KGFKDLLLIGNQARPDIFDLNIRKPEVLYEDVVEV---DERVVLEDQDEDPLDESAQIEVSGEFLRVEKKVDEEALRQDL  174 (1247)
T ss_pred             CCCHHHHHCCCCCCCCEEEECCCCCCHHHHHHEEC---CCEEEHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHH
T ss_conf             34123521155568860532366762465545130---006652330547433333124575299997058789999999


Q ss_pred             HHHHHCCCCEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEC----CCCCCCCH
Q ss_conf             9999669939975022278610078000238469999999999749624340----48300103
Q gi|254780676|r  251 DDLRTADVDFLTMGQYLQPTRKHHKVESFVTPQDFKSYETIAYSKGFLMVSA----SPLTRSSY  310 (329)
Q Consensus       251 ~DLr~~gvdilTiGQYL~Ps~~h~pV~ryv~P~eF~~~~~~a~~~Gf~~V~S----gPlVRSSY  310 (329)
T Consensus       175 k~l~~~G~~siav~----------l~HSyt~P~HE~~v~kiA~e~GF~~vSLSs~l~PMik~vp  228 (1247)
T KOG1939         175 KELYDKGVKSIAVV----------LLHSYTYPDHELEVGKIAKEIGFSHVSLSSKLMPMIKVVP  228 (1247)
T ss_pred             HHHHHCCCCEEEEE----------EECCCCCCCHHHHHHHHHHHHCCCCEECHHCCCCCEEEEC
T ss_conf             99987686548556----------3111457728889888998738660000201351215504