HHsearch alignment for GI: 254780676 and conserved domain: PRK05301
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional.
Probab=98.15 E-value=0.00028 Score=51.87 Aligned_cols=159 Identities=13% Similarity=0.150 Sum_probs=122.1
Q ss_pred ECCCCCCCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCC---CCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 665223535223446---789988882357999999997077518985054---45345325899999999998533586
Q gi|254780676|r 92 LGAICTRACTFCNVA---TGKPQPLDPQEPENISWAVRSMKLSHVVITSVD---RDDLDDGGAQHFAEVISAIRESAPST 165 (329)
Q Consensus 92 lG~~CTR~C~FC~V~---~G~P~~~D~~EP~rvA~av~~l~Lk~vViTSV~---RDDL~DgGA~hfa~~I~~Ir~~~P~~ 165 (329)
T Consensus 23 lT~~CNL~C~hCy~~~~~~~~~~ELs~~e~~~~id~l~~~Gv~~v~~tGGEPllr~D--------~~ei~~~a~~~--G~ 92 (375)
T PRK05301 23 LTYRCPLQCPYCSNPLDLARHGAELSTAEWIRVLREARALGVLQLHFSGGEPLLRKD--------LEELVAHARRL--GL 92 (375)
T ss_pred HHCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC--------HHHHHHHHHHC--CC
T ss_conf 314007878466985004876578999999999999998699889961865245668--------99999999976--97
Q ss_pred EEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCC-CCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECH
Q ss_conf 8998154623446899987410702332013830-002756389-70358999999999970891670140488764206
Q gi|254780676|r 166 TIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRP-GARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETR 243 (329)
Q Consensus 166 ~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp-~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~ 243 (329)
T Consensus 93 ~~~l~TNG~lit~~~a~~L~~~gl~~v~vSlDg~~~e~hD~~rG~~G~f~~~~~~i~~l~~~Gi~v~---i~~ti~r~N~ 169 (375)
T PRK05301 93 YTNLITSGVGLTEARLAALKAAGLDHIQLSFQDSDPELADRIAGTRGAFAQKLEVARLVKAHGYPLT---LNAVIHRHNI 169 (375)
T ss_pred EEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEE---EEEEECCCCH
T ss_conf 5899606745579999999850998899956779877877763788629999999999997498169---9987230568
Q ss_pred HHHHHHHHHHHHCCCCEEEC
Q ss_conf 88999999999669939975
Q gi|254780676|r 244 NEILQLMDDLRTADVDFLTM 263 (329)
Q Consensus 244 eEi~e~l~DLr~~gvdilTi 263 (329)
T Consensus 170 ~~l~~i~~la~~lGv~~~~l 189 (375)
T PRK05301 170 DQIPRIIELAVELGADRLEL 189 (375)
T ss_pred HHHHHHHHHHHHCCCCEEEE
T ss_conf 88999999999729982898