HHsearch alignment for GI: 254780676 and conserved domain: PRK05660

Probab=97.79  E-value=0.0015  Score=46.58  Aligned_cols=208  Identities=14%  Similarity=0.220  Sum_probs=132.1

Q ss_pred             CCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHCC-----CEEEEECCCCCCCCCCH------HHHHHHHHHHHHH
Q ss_conf             52235352234467--89988882357999999997077-----51898505445345325------8999999999985
Q gi|254780676|r   94 AICTRACTFCNVAT--GKPQPLDPQEPENISWAVRSMKL-----SHVVITSVDRDDLDDGG------AQHFAEVISAIRE  160 (329)
Q Consensus        94 ~~CTR~C~FC~V~~--G~P~~~D~~EP~rvA~av~~l~L-----k~vViTSV~RDDL~DgG------A~hfa~~I~~Ir~  160 (329)
T Consensus        14 PFC~~~C~YC~f~~~~~~~~~-~~~--~Y~~aL~~ei~~~~~~~~~~~i~tiy----~GGGTPs~L~~~~l~~l~~~i~~   86 (378)
T PRK05660         14 PWCVQKCPYCDFNSHALKGEV-PED--EYVDHLLADLDADLPLVQGREVHSIF----IGGGTPSLFSAEAIQRLLDGVRA   86 (378)
T ss_pred             CCCCCCCCCCCCCCCCCCCCC-CHH--HHHHHHHHHHHHHHHHCCCCEEEEEE----ECCCHHHHCCHHHHHHHHHHHHH
T ss_conf             789876999969650488877-699--99999999999987761797576999----78953330899999999999998


Q ss_pred             HCC-----CCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCE-EEECC
Q ss_conf             335-----8689981546234468999874107023320138300-0275638970358999999999970891-67014
Q gi|254780676|r  161 SAP-----STTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETVA-SNYLMVRPGARYFHSLRLLQRVKELDPL-IFTKS  233 (329)
Q Consensus       161 ~~P-----~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV~-rLy~~VRp~a~Y~rSL~vL~~aK~~~~~-i~TKS  233 (329)
T Consensus        87 ~f~~~~~~EiTiE~n-P~~~-~~~~l~~l~~~GvnRiSiGVQsf~~~~l~~lgR~h~~~~~~~ai~~~r~~gf~~in--i  162 (378)
T PRK05660         87 RLPFAPDAEITMEAN-PGTV-EADRFVGYQRAGVNRISIGVQSFSEEKLKRLGRIHGPDEAKRAAKLAQGAGLRSFN--L  162 (378)
T ss_pred             HCCCCCCCEEEEECC-CCCC-CHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEE--E
T ss_conf             579877714898457-0533-08899999980987599961437899999827999999999999999976996065--4


Q ss_pred             CEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHH-CCCCCCCCCCCCCCCHH------HHHHHHHHHHHCCCCEEECCCC
Q ss_conf             048876-420688999999999669939975022-27861007800023846------9999999999749624340483
Q gi|254780676|r  234 GIMLGL-GETRNEILQLMDDLRTADVDFLTMGQY-LQPTRKHHKVESFVTPQ------DFKSYETIAYSKGFLMVSASPL  305 (329)
Q Consensus       234 GlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQY-L~Ps~~h~pV~ryv~P~------eF~~~~~~a~~~Gf~~V~SgPl  305 (329)
T Consensus       163 DLiyGlP~Qt~~~~~~~l~~~~~l~p~his~Y~L~~e~~T~~~~-~~~~lp~~~~~~~my~~~~~~L~~~Gy~~yeisnF  241 (378)
T PRK05660        163 DLMHGLPDQSLEEALDDLRQAIALNPPHLSWYQLTIEPNTVFGS-RPPVLPDDDALWDIFEQGHQLLTAAGYQQYETSAY  241 (378)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHH-CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             23268999889999999999864498805788888658973764-67669985899999999999999779987861277


Q ss_pred             CCCCHHHH
Q ss_conf             00103189
Q gi|254780676|r  306 TRSSYHAG  313 (329)
Q Consensus       306 VRSSY~A~  313 (329)
T Consensus       242 Ak~g~~~~  249 (378)
T PRK05660        242 AKPGYQCQ  249 (378)
T ss_pred             CCCCHHHH
T ss_conf             78870222