HHsearch alignment for GI: 254780676 and conserved domain: PRK05927
>PRK05927 hypothetical protein; Provisional.
Probab=99.08 E-value=2.6e-09 Score=87.33 Aligned_cols=237 Identities=17% Similarity=0.225 Sum_probs=158.8
Q ss_pred HHHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEE-----CCCCCCCCCCCCCCC--CCCCC--CCHHHHHHHHHHHHHH
Q ss_conf 99999749823652578878767508972699986-----652235352234467--89988--8823579999999970
Q gi|254780676|r 58 YNILRSRNLTTVCEEAGCPNIGECWNKNHATFMIL-----GAICTRACTFCNVAT--GKPQP--LDPQEPENISWAVRSM 128 (329)
Q Consensus 58 ~~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMil-----G~~CTR~C~FC~V~~--G~P~~--~D~~EP~rvA~av~~l 128 (329)
T Consensus 13 ~~L~~~~dl~~l~~~A~~~-R~~~~~g~~Vtyv~n~~iN~TNvC~~~C~FCaF~r~~~~~~ay~ls~eei~~~~~e~~~~ 91 (350)
T PRK05927 13 LELFLSSPLEELQERADSL-RKQRYPQNTVTYVLDANPNYTNICKIDCTFCAFYRKPRSSDAYLLSFDEFRSLMQRYVSS 91 (350)
T ss_pred HHHHHCCCHHHHHHHHHHH-HHHHCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 9986179999999999999-997559986999620487741256576934774258999875327999999999999866
Q ss_pred CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC-------CC--CHHHHHHHHHCCCHHHHH-CCC-
Q ss_conf 7751898505445345325899999999998533586899815462-------34--468999874107023320-138-
Q gi|254780676|r 129 KLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDF-------LR--KPHALEKVVSAKPDVFNH-NLE- 197 (329)
Q Consensus 129 ~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf-------~G--~~~al~~v~~A~pdV~nH-NiE- 197 (329)
T Consensus 92 G~tEv~i~GG~~---P~l~~eyy~~l~r~ik~~~P~i~ihafs~~Ei~~~a~~~g~s~~e~L~~Lk~AGL~slPGgGAEI 168 (350)
T PRK05927 92 GVKTVLLQGGVH---PQLGIDYLEELVRITVQEFPSLHPHFFSAVEIAHAAQVSGISTEQALQRLWDAGQRTIPGGGAEI 168 (350)
T ss_pred CCCEEEEECCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 983899826889---99986999999999997488866566999999999988599999999999973767689987501
Q ss_pred CCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCC----EEECCHHCCCCCC
Q ss_conf 30002756389-703589999999999708916701404887642068899999999966993----9975022278610
Q gi|254780676|r 198 TVASNYLMVRP-GARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVD----FLTMGQYLQPTRK 272 (329)
Q Consensus 198 TV~rLy~~VRp-~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvd----ilTiGQYL~Ps~~ 272 (329)
T Consensus 169 l~d~VR~~I~p~K~s~~~Wl~i~~~AH~lG--i~ttaTmlyGhiEt~e~ri~HL~~lR~lQdeTgGF~~FIpl~F~p~nt 246 (350)
T PRK05927 169 LSERVRKIISPKKMGPDGWINFHKLAHRLG--FRSTATMMFGHVENPEDILLHLQTLRDAQDENPGFYSFIPWSYKPGNT 246 (350)
T ss_pred CCHHHHHHCCCCCCCHHHHHHHHHHHHHCC--CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC
T ss_conf 687777514888889999999999999859--975202463687999999999999999876509879999467654887
Q ss_pred CC--CCCCCCCHHHHHHHHHHHHHC----CCCEEEC
Q ss_conf 07--800023846999999999974----9624340
Q gi|254780676|r 273 HH--KVESFVTPQDFKSYETIAYSK----GFLMVSA 302 (329)
Q Consensus 273 h~--pV~ryv~P~eF~~~~~~a~~~----Gf~~V~S 302 (329)
T Consensus 247 ~l~~~~~~~~~~~~--~Lr~~AvaRl~Ldn~~hIqa 280 (350)
T PRK05927 247 ALGRRVPQQASPEL--YYRILALARIFLDNFDHIAA 280 (350)
T ss_pred HHHHCCCCCCCHHH--HHHHHHHHHHHCCCCCCEEE
T ss_conf 46542788998457--59999999997069886372