HHsearch alignment for GI: 254780676 and conserved domain: PRK06245

>PRK06245 cofG FO synthase subunit 1; Reviewed.
Probab=99.23  E-value=3.5e-10  Score=93.51  Aligned_cols=210  Identities=17%  Similarity=0.222  Sum_probs=133.2

Q ss_pred             EEEECCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHH-----HHHHHHHHHHHHH
Q ss_conf             99866522353522344678998--8882357999999997077518985054453453258-----9999999999853
Q gi|254780676|r   89 FMILGAICTRACTFCNVATGKPQ--PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGA-----QHFAEVISAIRES  161 (329)
Q Consensus        89 FMilG~~CTR~C~FC~V~~G~P~--~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA-----~hfa~~I~~Ir~~  161 (329)
T Consensus        15 ~In~TNiC~~~C~fCaF~~~~~~a~~ls~eev~~~~~ea~~~G~tEvl~~gG~~P~~~~~~~~~l~~~~~~~~~~~~~~~   94 (336)
T PRK06245         15 FIPLTYECRNRCGYCTFRPDPGEASLLSPEEVREILERGQDAGCTEALFTFGEVPDESEEIREQLAEPGYSSWLEYLYDL   94 (336)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             61677540268825867468875687799999999999997698399980578866368999999970755077889998


Q ss_pred             CCCCEEEEECCCCCC---CHHHHHHHHH--CCCHHHHHCCCC-CCCCCCCC---CCCCHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             358689981546234---4689998741--070233201383-00027563---89703589999999999708916701
Q gi|254780676|r  162 APSTTIEVLTPDFLR---KPHALEKVVS--AKPDVFNHNLET-VASNYLMV---RPGARYFHSLRLLQRVKELDPLIFTK  232 (329)
Q Consensus       162 ~P~~~IEvLiPDf~G---~~~al~~v~~--A~pdV~nHNiET-V~rLy~~V---Rp~a~Y~rSL~vL~~aK~~~~~i~TK  232 (329)
T Consensus        95 ~~~~le~gllph~n~G~ls~~el~~Lk~v~asmG~---mlE~~se~l~~~~h~~~P~K~~~~rL~~ie~Ah~lg--IptT  169 (336)
T PRK06245         95 CELALETGLLPHTNAGILSRAEMEALKPVNASMGL---MLEQTSPRLLETVHRHSPGKDPELRLETIEWAGELK--IPFT  169 (336)
T ss_pred             HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCC---CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC--CCCE
T ss_conf             58887636552236676789999987535976675---712356898876304489878899999999999839--9722


Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHCCCC---E-EECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH---C-CCCEEECCC
Q ss_conf             404887642068899999999966993---9-9750222786100780002384699999999997---4-962434048
Q gi|254780676|r  233 SGIMLGLGETRNEILQLMDDLRTADVD---F-LTMGQYLQPTRKHHKVESFVTPQDFKSYETIAYS---K-GFLMVSASP  304 (329)
Q Consensus       233 SGlMvGLGEt~eEi~e~l~DLr~~gvd---i-lTiGQYL~Ps~~h~pV~ryv~P~eF~~~~~~a~~---~-Gf~~V~SgP  304 (329)
T Consensus       170 atmL~G~gET~eeRi~hL~~IR~lq~~tGgfqefI~~~F~p~~~-t~m~~~~~~~~~e~l~~iAvARiiL~~~i~IQapp  248 (336)
T PRK06245        170 TGLLIGIGETWEDRIESLEAIAELHERYGHIQEVIIQNFRPKPG-IPMENHPEPSPEEMPRVVALARLILPPDISIQVPP  248 (336)
T ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             02452066999999999999999886349757995068778987-53346999799999999999999669985797698